DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cpr56F and CG10953

DIOPT Version :8

Sequence 1:NP_611470.1 Gene:Cpr56F / 37299 FlyBaseID:FBgn0034499 Length:217 Species:Drosophila melanogaster
Sequence 2:NP_001261042.1 Gene:CG10953 / 36941 FlyBaseID:FBgn0034204 Length:278 Species:Drosophila melanogaster

Alignment Length:107 Identity:28/107 - (26%)
Similarity:37/107 - (34%) Gaps:47/107 - (43%)


  Fly    22 PVPQNQYLPPNQSP-------QAPSNNYLP-PTQGYQ---------------------------- 50
            |.|.|.|:||..:|       .||....:| |...||                            
  Fly   135 PAPVNTYIPPAPAPAPVYQPAPAPIPVSIPAPAPVYQPAPAPVVIPAPAPAPVVIPAPAPAPVVI 199

  Fly    51 ---SPSSNYLPPQRAGGNGGAPSNSY-GAPIAPPQGQYGAPA 88
               :|..:|:||  |..:..||:..| .|||:.|     |||
  Fly   200 PAPAPVKSYVPP--APISIPAPAPVYQPAPISIP-----APA 234

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Cpr56FNP_611470.1 Chitin_bind_4 128..179 CDD:278791
CG10953NP_001261042.1 FLO_LFY 23..>60 CDD:279962
GYR 261..278 CDD:128953
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 FOG0000727
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

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