DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: Obp56h and Obp56d

Sequence 1:NP_001188979.1 Gene:Obp56h FlyBaseID:FBgn0034475 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_001286619.1 Gene:Obp56d FlyBaseID:FBgn0034470 Length:131 Species:Drosophila melanogaster

Alignment Length:141 Identity:33/142 (23%)
Similarity:59/142 (42%) Gaps:31/142 (22%)


  Fly     6 FCIALAAFLSMG----QCNPDFRQIMQQ----CMETNQVTEADLKEFMASGMQSSAKENLKCYTK 62
            |.|.|:..|::.    |.:.:.:.:...    |.:...:|: |....:.:|....:...:||:..
  Fly     3 FLIVLSVILAISAAELQLSDEQKAVAHANGALCAQQEGITK-DQAIALRNGNFDDSDPKVKCFAN 66

  Fly    63 CLMEKQGHLTNGQFNAQAML---------DTLKNVPQIKDKMDEISSGVNACKDIKGTNDCDTAF 118
            |.:||.|.|.||:.....:|         |.:|.| |.|            |...||.:.||||:
  Fly    67 CFLEKIGFLINGEVQPDVVLAKLGPLAGEDAVKAV-QAK------------CDATKGADKCDTAY 118

  Fly   119 KVTMCLKEHKA 129
            ::..|..:::|
  Fly   119 QLFECYYKNRA 129

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Obp56hNP_001188979.1 PhBP 26..128 CDD:214783 27/115 (23%)
Obp56dNP_001286619.1 PBP_GOBP 19..127 CDD:279703 28/122 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 P PTHR11857
RoundUp 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.