DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Obp56h and Obp28a

DIOPT Version :10

Sequence 1:NP_611448.2 Gene:Obp56h / 37271 FlyBaseID:FBgn0034475 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_523505.1 Gene:Obp28a / 34031 FlyBaseID:FBgn0011283 Length:143 Species:Drosophila melanogaster


Alignment Length:111 Identity:31/111 - (27%)
Similarity:50/111 - (45%) Gaps:17/111 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 QQCMETNQVTEADLKEFMASGMQSSAKENLKCYTKCLMEKQGHL-TNGQFNAQAMLDTLK----N 87
            :.||.....|:|||:|.:..  |.::....||...|:|:..|.| .||:.:.:|..:..|    |
  Fly    36 ESCMPEVGATDADLQEMVKK--QPASTYAGKCLRACVMKNIGILDANGKLDTEAGHEKAKQYTGN 98

  Fly    88 VP-QIKDKMDEISSGVNACKDIKGTND-CDTAFKVTMCL----KEH 127
            .| ::|..: ||.   :.|..|...:| |:.|.....|.    |:|
  Fly    99 DPAKLKIAL-EIG---DTCAAITVPDDHCEAAEAYGTCFRGEAKKH 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56hNP_611448.2 PhBP 26..128 CDD:214783 31/111 (28%)
Obp28aNP_523505.1 PBP_GOBP 24..134 CDD:460193 29/103 (28%)

Return to query results.
Submit another query.