DRSC/TRiP Functional Genomics Resources

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Protein Alignment Obp56h and Obp56c

DIOPT Version :10

Sequence 1:NP_611448.2 Gene:Obp56h / 37271 FlyBaseID:FBgn0034475 Length:134 Species:Drosophila melanogaster
Sequence 2:NP_995902.1 Gene:Obp56c / 170882 FlyBaseID:FBgn0046879 Length:245 Species:Drosophila melanogaster


Alignment Length:182 Identity:34/182 - (18%)
Similarity:64/182 - (35%) Gaps:60/182 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FTLFCIALAAFLSM----------------GQCNPDFRQIMQQCMETNQVTEADLKEFMASGMQS 51
            |.:|.|:....||:                |..|...:::::.||...:::.:.||.|..|.|.|
  Fly    26 FFIFYISFTRSLSVSLNMSMTRTLVPDPPNGTENKLSQEMLRACMRRTEISMSQLKLFHMSLMNS 90

  Fly    52 --------------------------------------SAKENLKCYTKCLMEKQGHLTNGQFNA 78
                                                  ...|.|:|:..||.|.   |...::|.
  Fly    91 DYNNDNDIAPTPVQSIGDVNNLGDLDFNGNSQMPYLDLKHNEPLQCFVSCLYET---LDLDRYNV 152

  Fly    79 QAMLDTLKNVPQIKDKMDEISSGVNACKDIKGTNDCDTAFKVTMCLKEHKAI 130
             .:.:..||  |::..:....:.:..|.|::|...|:.|:|:.:|....|.:
  Fly   153 -LLEEAFKN--QVQTIIQHEKAEIKECSDLQGKTRCEAAYKLHLCYNHLKTL 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Obp56hNP_611448.2 PhBP 26..128 CDD:214783 26/139 (19%)
Obp56cNP_995902.1 PBP_GOBP <131..195 CDD:467938 17/69 (25%)

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