DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rep and GDI1

DIOPT Version :10

Sequence 1:NP_477420.1 Gene:Rep / 37246 FlyBaseID:FBgn0026378 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001484.1 Gene:GDI1 / 2664 HGNCID:4226 Length:447 Species:Homo sapiens


Alignment Length:499 Identity:128/499 - (25%)
Similarity:212/499 - (42%) Gaps:101/499 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LPEQFDLVVIGTGFTESCIAAAGSRIGKSVLHLDSNEYYGDVWSSFS-MDALCARLDQEVEPHSA 68
            :.|::|::|:|||.||..::...|..||.|||:|.|.|||...||.: ::.|..|......|..:
Human     1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPES 65

  Fly    69 LRNARYTWHSMEKESETDAQSWNRDSVLAKSRRFSLDLCPRILYAAGELVQLLIKSNICRYAEFR 133
            :...|               .||            :||.|:.|.|.|:||::|:.:.:.||.:|:
Human    66 MGRGR---------------DWN------------VDLIPKFLMANGQLVKMLLYTEVTRYLDFK 103

  Fly   134 AVDHVCMRHNGEIVSVPCSRSDVFNTKTLTIVEKRLLMKFL---------------------TAC 177
            .|:...:...|:|..||.:.::...:..:.:.|||...|||                     |:.
Human   104 VVEGSFVYKGGKIYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQTTSM 168

  Fly   178 ND-YGEDKCNEDSLEFRGRTFLEYLQAQRVTEKISS-CVMQAIAMCGPSTSFEEGMQRTQRFLGS 240
            .| |.:....:|.::|.|.....|    |..:.:.. |:              |.:.|.:.:..|
Human   169 RDVYRKFDLGQDVIDFTGHALALY----RTDDYLDQPCL--------------ETVNRIKLYSES 215

  Fly   241 LGRYGNTPFLFPMYGCGELPQCFCRLCAVYGGIYCLKRAVDDIALDSNSNEFLLSSAGKTLRAKN 305
            |.|||.:|:|:|:||.|||||.|.||.|:|||.|.|.:.||||.:: |.....:.|.|:..|.|.
Human   216 LARYGKSPYLYPLYGLGELPQGFARLSAIYGGTYMLNKPVDDIIME-NGKVVGVKSEGEVARCKQ 279

  Fly   306 VVSAPGYTPVSKGIELKPHISRGLFISSSPLGNEELNKGGGGVNLLRLL--DNEGGREA--FLIQ 366
            ::..|.|.|  ..:.....:.|.:.|.|.|:      |.....|..:::  .|:..|::  ::..
Human   280 LICDPSYIP--DRVRKAGQVIRIICILSHPI------KNTNDANSCQIIIPQNQVNRKSDIYVCM 336

  Fly   367 LSHYTGACPEGLYI------FHLTTPALSEDPASDLA-------IFTSQLF----DQSDAQIIFS 414
            :|:......:|.||      ...|.|....:||.:|.       :..|.|:    |..::|:..|
Human   337 ISYAHNVAAQGKYIAIASTTVETTDPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCS 401

  Fly   415 -SYFTIAAQSSKSPAAEHIYYTDPPTYELDYDAAIANARDIFGK 457
             ||.......:.....:.||.....| ..|::.......|:||:
Human   402 CSYDATTHFETTCNDIKDIYKRMAGT-AFDFENMKRKQNDVFGE 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RepNP_477420.1 Rossmann-fold NAD(P)(+)-binding proteins 4..397 CDD:473865 113/425 (27%)
GDI1NP_001484.1 GDI 1..436 CDD:395792 125/489 (26%)

Return to query results.
Submit another query.