DRSC/TRiP Functional Genomics Resources

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Protein Alignment CalpA and Capn12

DIOPT Version :10

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:XP_038967508.1 Gene:Capn12 / 308476 RGDID:1307341 Length:766 Species:Rattus norvegicus


Alignment Length:53 Identity:12/53 - (22%)
Similarity:22/53 - (41%) Gaps:18/53 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 YAVSDALTGDNKSQQESRSGDVVSGSYSLIEPDGTQ--------RVVEYTADP 96
            ::|:..||    ::|:.|.      .:|||:....:        |....|:||
  Rat   434 FSVTSQLT----TEQDIRR------DWSLIQQAAREVLQSGVVTRQPSVTSDP 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:459889
Calpain_III 416..569 CDD:238132
EFh_PEF_CalpA_B 600..843 CDD:320071
EF-hand motif 600..627 CDD:320071
EF-hand motif 717..747 CDD:320071
EF-hand motif 748..778 CDD:320071
EF-hand motif 784..812 CDD:320071
EF-hand motif 813..843 CDD:320071
Capn12XP_038967508.1 Peptidase_C2 46..339 CDD:459889
Calpain_III 352..530 CDD:238132 12/53 (23%)
EFh_PEF 567..693 CDD:355382
EF-hand motif 596..623 CDD:320069
EF-hand motif 624..653 CDD:320069
EF-hand motif 660..688 CDD:320069
Blue background indicates that the domain is not in the aligned region.

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