DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CalpA and clp-9

DIOPT Version :10

Sequence 1:NP_001286613.1 Gene:CalpA / 37232 FlyBaseID:FBgn0012051 Length:843 Species:Drosophila melanogaster
Sequence 2:NP_001256150.1 Gene:clp-9 / 266916 WormBaseID:WBGene00011705 Length:718 Species:Caenorhabditis elegans


Alignment Length:59 Identity:17/59 - (28%)
Similarity:27/59 - (45%) Gaps:10/59 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 DPNPQY---SYS---YAVSDALTGDNKSQQESRSGDVVSGSYSLIEPDGTQRVVEYTAD 95
            ||:..|   |||   ....|.:||:..:|.... |:.|:|...|  || .:.::...:|
 Worm   409 DPSCNYLVCSYSNRTICFVDFVTGELVAQATGH-GEAVTGVIFL--PD-CKHIISVASD 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CalpANP_001286613.1 Peptidase_C2 104..400 CDD:459889
Calpain_III 416..569 CDD:238132
EFh_PEF_CalpA_B 600..843 CDD:320071
EF-hand motif 600..627 CDD:320071
EF-hand motif 717..747 CDD:320071
EF-hand motif 748..778 CDD:320071
EF-hand motif 784..812 CDD:320071
EF-hand motif 813..843 CDD:320071
clp-9NP_001256150.1 CysPc 123..453 CDD:128526 14/46 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.