DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10062 and Naalad2

DIOPT Version :10

Sequence 1:NP_001261089.1 Gene:CG10062 / 37224 FlyBaseID:FBgn0034439 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_001100272.1 Gene:Naalad2 / 300384 RGDID:1305872 Length:778 Species:Rattus norvegicus


Alignment Length:228 Identity:55/228 - (24%)
Similarity:84/228 - (36%) Gaps:57/228 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 MHWEMVNMYQGIQNVVVKLSEKNSTN-ENYLLINSHYDS-VPGSPGAGDDGSMVVTMLEVMRVIA 186
            ||...:|....|.||:..:  :.||. :.|:::..|.|| |.|       |....|...|::.||
  Rat   372 MHVHNINKITRIYNVIGTI--RGSTEPDRYVILGGHRDSWVFG-------GIDPTTGTAVLQEIA 427

  Fly   187 KSGDPLAH-------PIVFLFNGAEENPLQASHAFITQHKWA-KNCK-------ALINLDSAGSG 236
            :|...|.:       .|:|....|||..|..|      .:|| :|.|       |.||.|||..|
  Rat   428 RSFGKLVNGGWKPRRTIIFASWDAEEFGLLGS------TEWAEENAKILQERSIAYINSDSAIEG 486

  Fly   237 GREILFQSGP-NHPWLMNYYRNVPHPFANTLAEELFQA----------------GYIPSDTDFRI 284
            ...:.....| .|..:....|.:..|.....::.|:::                ..:.|.:||..
  Rat   487 NYTLRVDCTPLLHQLVYKVAREISSPDDGFESKSLYESWLEKDPSPENKERPRINKLGSGSDFEA 551

  Fly   285 FRDYGGVPGLDMAYI-------FNGY-VYHTKY 309
            :....|:......|.       ::.| ||||.|
  Rat   552 YFQRLGIASGRARYTKNKKTDKYSSYPVYHTIY 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10062NP_001261089.1 M28_Fxna_like 59..364 CDD:349872 55/228 (24%)
Naalad2NP_001100272.1 Zinc_peptidase_like 86..>143 CDD:472712
PA_GCPII_like 148..374 CDD:239036 1/1 (100%)
M28_PSMA_like <382..623 CDD:349942 52/218 (24%)
TFR_dimer 655..774 CDD:461238
Blue background indicates that the domain is not in the aligned region.

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