DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG11961 and TRE1

Sequence 1:NP_001246418.1 Gene:CG11961 FlyBaseID:FBgn0034436 Length:891 Species:Drosophila melanogaster
Sequence 2:NP_015149.1 Gene:TRE1 SGDID:S000006097 Length:783 Species:Saccharomyces cerevisiae

Alignment Length:122 Identity:30/123 (24%)
Similarity:49/123 (40%) Gaps:37/123 (30%)


  Fly   136 SGTANDIEVDVQVASGSYVHWSMVNMYQSIQNIVVKI-------------SPKNTNSTTYLLVNS 187
            ||:.||..:|:.|.:.       :.....:.:||.||             :|:  ||.:|   .:
Yeast   382 SGSLNDCRLDLLVQTA-------IRERHPVHDIVGKIEGSEQAGRAIVIAAPR--NSASY---GT 434

  Fly   188 HYDSVPAGPGAGDDGSMVATMMEVL--RVLAKSD-KPLKNPVVFLFNGAEENPLQAS 241
            .|.|.         |::|...:..|  .::.|.| |||:|.....|.|:|.|...|:
Yeast   435 MYPSF---------GTVVLLSLIQLYQEMVYKFDWKPLRNIYFISFGGSEFNEAGAT 482

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG11961NP_001246418.1 M28_Fxna_like 91..395 CDD:193497 30/123 (24%)
TRE1NP_015149.1 PA 221..374 CDD:333703
M28_PMSA_TfR_like 354..617 CDD:193496 30/123 (24%)
TFR_dimer 654..766 CDD:309400
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG2234
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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