DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11961 and VPS70

DIOPT Version :10

Sequence 1:NP_725876.1 Gene:CG11961 / 37221 FlyBaseID:FBgn0034436 Length:891 Species:Drosophila melanogaster
Sequence 2:NP_012660.1 Gene:VPS70 / 853590 SGDID:S000003887 Length:811 Species:Saccharomyces cerevisiae


Alignment Length:355 Identity:78/355 - (21%)
Similarity:132/355 - (37%) Gaps:81/355 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 RLPR----PLTIQDEETHPDQFIAERAEKNLRELVSLGPRVVGSRQNEMAALKMLSQKMQKIRSG 137
            |:||    |::.:|.     |.|.||.  |.|.. .:||   ||...:..:....|..:.|:.  
Yeast   361 RVPRIPSVPMSARDV-----QPILERL--NGRGF-QIGP---GSNIKDFGSFTGPSSSIDKVH-- 412

  Fly   138 TANDIEVDVQVASGSYVHWSMVNMYQSIQNIVVKISPKNTNSTTYLLVNSHYDSVPAGPGAGDDG 202
            ..|::..:::..|.                  |::|.....:...:::.:|.||: |...|||..
Yeast   413 LHNELTYNIKEMSS------------------VEVSIPGIFTEGEIIIGAHRDSL-ASSSAGDAN 458

  Fly   203 SMVATMMEVLRVLAK----SDKPLKNPVVFLFNGAEENPLQAS------HAFITQHKWAKYCKAL 257
            |..|.::|:.|.::|    ..|||: |:..:....|.:.|..|      ||.|.:.:...|    
Yeast   459 SGSAILLEIARGMSKLLKHGWKPLR-PIKLISWDGERSGLLGSTDYAEAHAAILRRRALVY---- 518

  Fly   258 INLDSCGNGGREILFQSGPNHPWLMKNYRRAIKHPYASTMGEE---LFQH---------NFIPSD 310
            :|||:..:|..   |....| |.|......|.|  .....|.|   ||.|         :.:...
Yeast   519 LNLDNAISGTN---FHCKAN-PLLQDVIYEAAK--LTEFNGHEDWSLFDHWKYTSNATISLLDGL 577

  Fly   311 TDFRIFRDHGSVPGLDMAYTYN---GFVYHTR--HDK---AEIFPRGSFQ-HTGDNLLALVRQIA 366
            :.:..|:.|..||.....:..|   |.|||:.  .|.   .|.|....:: |   |.:|:...:.
Yeast   578 SSYTSFQYHLGVPAAHFQFNANDTSGAVYHSNSVFDSPTWLEKFTNSDYKLH---NTMAMFVGLT 639

  Fly   367 NSPEIENSAKYAKGHTIYFDVMGWFLVFYT 396
            .....||.......|.....:..|::.:::
Yeast   640 TLMLSENELARFNTHVYLKKIYNWYIAWHS 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11961NP_725876.1 M28_Fxna_like 91..395 CDD:349872 73/334 (22%)
MFS <539..>658 CDD:475125
VPS70NP_012660.1 Zinc_peptidase_like 135..>187 CDD:472712
PA_GCPII_like 187..413 CDD:239036 17/64 (27%)
M28_PMSA_TfR_like 419..649 CDD:349871 58/262 (22%)
TFR_dimer <725..799 CDD:461238
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.