DRSC/TRiP Functional Genomics Resources

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Protein Alignment: CG11961 and Cpq

Sequence 1:NP_001246418.1 Gene:CG11961 FlyBaseID:FBgn0034436 Length:891 Species:Drosophila melanogaster
Sequence 2:NP_113828.1 Gene:Cpq RGDID:628610 Length:472 Species:Rattus norvegicus

Alignment Length:240 Identity:54/241 (22%)
Similarity:87/241 (36%) Gaps:47/241 (20%)


  Fly   138 TANDIEVDVQVASGS---YVHWSM-------VNMYQSIQNIVVKISPKNTNSTTYLLVNSHYDSV 192
            |..|.|:..::||..   .:|..|       .:.:.::..|.....|:..     :||:.|.||.
  Rat   235 TIEDAEMMSRMASRGDKIVIHLKMGAKTYPDTDSFNTVAEITGSKYPEEV-----VLVSGHLDSW 294

  Fly   193 PAGPGAGDDGSMVATMMEVLRVLAKSD-KPLKNPVVFLFNGAEENPLQASHAFITQHK--WAKYC 254
            ..|.||.|||.......|.|.::.... :|.:...:.|:...|:..:.||. :...||  .:|| 
  Rat   295 DVGQGALDDGGGAFISWEALSLVKDLGLRPKRTLRLVLWTAEEQGGVGASQ-YYELHKANISKY- 357

  Fly   255 KALINLDSCGNGGREILFQSGPNHPWLMKNYRRAIKHPYASTMGEELFQHNFIPSDTDFRIFRDH 319
            ..::..||.......:.|........:||.. .::..|...|   ::|..   ...||...:...
  Rat   358 SLVMEADSGTFLPTGLQFTGSDKARAIMKEV-MSLLQPLNIT---KVFND---AEGTDINFWIQA 415

  Fly   320 GSVPGL---DMAYTYNGFVYHTRHDKAEIFPRGSFQHTGDNLLAL 361
            | |||.   |..|.|  |.:|..|              ||.:.|:
  Rat   416 G-VPGASLRDDLYKY--FFFHHSH--------------GDTMTAM 443

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG11961NP_001246418.1 M28_Fxna_like 91..395 CDD:193497 54/241 (22%)
CpqNP_113828.1 M28_Pgcp_like 47..449 CDD:193504 54/241 (22%)
PA_M28_2 130..256 CDD:240119 6/21 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG2234
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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