DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11961 and Tfr2

DIOPT Version :10

Sequence 1:NP_725876.1 Gene:CG11961 / 37221 FlyBaseID:FBgn0034436 Length:891 Species:Drosophila melanogaster
Sequence 2:NP_056614.3 Gene:Tfr2 / 50765 MGIID:1354956 Length:798 Species:Mus musculus


Alignment Length:628 Identity:129/628 - (20%)
Similarity:197/628 - (31%) Gaps:257/628 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 GNKIKWFWAPA---------------FFGFWLLLYVTISIPACHRLPRPLTIQDEETHPD----- 92
            |..|...||.|               |.|.:||.||... .:|......:.:.||:.:|:     
Mouse    65 GRSIPIPWAAAGRKAAPYLVLITLLIFTGAFLLGYVAFR-GSCQACGDSVLVVDEDVNPEDSGRT 128

  Fly    93 ------------QFIAE-RAEKNLRELVSLGPRVVGSRQNEMAAL------KMLSQKMQKIRSGT 138
                        :|:.| |.|..:| |.||..||.||.:  ||.|      |:..||:..:.:.|
Mouse   129 TLYWSDLQAMFLRFLGEGRMEDTIR-LTSLRERVAGSAR--MATLVQDILDKLSRQKLDHVWTDT 190

  Fly   139 ANDIEVDVQV---ASGSYVHWSMVNMYQSIQNIVVKISPK------NTNSTTYLLVNSHYDSVPA 194
            .   .|.:|.   |..:.:||  |:...|:|..:....|:      .|.:.|..||.:||     
Mouse   191 H---YVGLQFPDPAHANTLHW--VDADGSVQEQLPLEDPEVYCPYSATGNATGKLVYAHY----- 245

  Fly   195 GPGAGDD------------GSMVATMMEVL----RVLAKSDKPLKNPVVFL----FNGAEENPLQ 239
              |..:|            ||::...:.:.    :|....|...:..:::.    |:.....|..
Mouse   246 --GRSEDLQDLKAKGVELAGSLLLVRVGITSFAQKVAVAQDFGAQGVLIYPDPSDFSQDPHKPGL 308

  Fly   240 ASHAFITQHKWAKYCKALINLDSCGNG-------------------------------GREILFQ 273
            :||..:..|         ::|   |.|                               ..:|..|
Mouse   309 SSHQAVYGH---------VHL---GTGDPYTPGFPSFNQTQFPPVESSGLPSIPAQPISADIADQ 361

  Fly   274 -----SGPNHPWLMKNYRRAIKHPYASTMGEE--LFQHNFIPSDTDFRIFR--------DHGSV- 322
                 :||..|...|.:...  .||....|.:  |..:|...|.....||.        ||..| 
Mouse   362 LLRKLTGPVAPQEWKGHLSG--SPYRLGPGPDLRLVVNNHRVSTPISNIFACIEGFAEPDHYVVI 424

  Fly   323 --------PG-----------LDMAYTY-----NGFVYHTRHDKAEIF---PRGSFQHTGDNLLA 360
                    ||           |::..|:     |||    |..::.:|   ..|.|...|     
Mouse   425 GAQRDAWGPGAAKSAVGTAILLELVRTFSSMVSNGF----RPRRSLLFISWDGGDFGSVG----- 480

  Fly   361 LVRQIANSPEIENSAKYAKGHTIYFDVMGWFLVFYTETEGVILN----------VIVSLVSIGIC 415
                         :.::.:|   |..|:....|.|...:..:|.          ::|||:     
Mouse   481 -------------ATEWLEG---YLSVLHLKAVVYVSLDNSVLGDGKFHAKTSPLLVSLI----- 524

  Fly   416 GYAFKLMSVNSGIKLEKILKKV------GHTLLVQILSVVVGAILPVLLGLFMDAVHLPLSWFSN 474
                           |.|||:|      |.||..|:..........|:..|.||:     |.:| 
Mouse   525 ---------------ENILKQVDSPNHSGQTLYEQVALTHPSWDAEVIQPLPMDS-----SAYS- 568

  Fly   475 SWLILGLYFTTFFFGLAIVPALYFHWTKRDKLPIGQRVQLLLH 517
                    ||.|    |.|||:.|.:.:.|      ||...||
Mouse   569 --------FTAF----AGVPAVEFSFMEDD------RVYPFLH 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11961NP_725876.1 M28_Fxna_like 91..395 CDD:349872 82/430 (19%)
MFS <539..>658 CDD:475125
Tfr2NP_056614.3 Endocytosis signal. /evidence=ECO:0000255 23..26
PA_TfR 206..396 CDD:239043 36/212 (17%)
M28_TfR 404..637 CDD:349946 54/259 (21%)
TFR_dimer 664..788 CDD:461238
Blue background indicates that the domain is not in the aligned region.

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