DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11961 and gcp-2.2

DIOPT Version :10

Sequence 1:NP_725876.1 Gene:CG11961 / 37221 FlyBaseID:FBgn0034436 Length:891 Species:Drosophila melanogaster
Sequence 2:NP_509928.3 Gene:gcp-2.2 / 183230 WormBaseID:WBGene00007954 Length:779 Species:Caenorhabditis elegans


Alignment Length:389 Identity:86/389 - (22%)
Similarity:143/389 - (36%) Gaps:102/389 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 NMYQSIQNIVVKISPKNTNSTTYLLVNSHYDSVPAGPGAGDDGSMVATMMEVLRVLAKSDK---- 220
            |..:.||||:..|. .:.....::||::|||:...  ||.|..|..:|::||.|.|.:...    
 Worm   368 NEERKIQNIMGYIK-GSQEPDKFVLVSNHYDAWTY--GAVDPNSGTSTLLEVSRALKQYQNQTGW 429

  Fly   221 -PLKNPVVFLFNGAEENPLQASHAFITQHK--WAKYCKALINLDSCGNGGREILFQSGPNHPWLM 282
             |.:: ::|....|||..|..|..|..:::  ..:...|:||:|..| |.:.:|..|.|....::
 Worm   430 IPARS-ILFAHWDAEEYGLIGSTEFAEEYRLQLMRRAVAVINMDLIG-GNQTLLGLSNPTVANVL 492

  Fly   283 KNYRRAIKHPYASTM--GEELFQHN---FIPSDTDFRIFRDHGSVPGLDMAYTYNGFVYHTRHDK 342
            ::....::.|..:.|  |.:....:   :.||..:                        .:.|..
 Worm   493 RSAAANVEQPNPTEMEQGRKTLYDSWKYYAPSKNN------------------------RSTHPY 533

  Fly   343 AEIFPRGS-----FQHTGDNLLALVRQIANSPEIENSAKYAKGHTIYFDVMGWFLVFYTETEGVI 402
            ..|...||     |.:.|..::..:....::|     ..|...||||            ||..:|
 Worm   534 QRIPAGGSDHLPFFDYLGIPIVFFITSSLDAP-----PTYPLYHTIY------------ETPYLI 581

  Fly   403 LNVIVSLVSIGICGYAFKLMSVNSGIKLEKILKKVGHTLLVQILSVVVGAILPVLLGLFMD---A 464
            .|::..       ||              |:.|.:....:..||......|||..|...||   .
 Worm   582 ENIMDP-------GY--------------KVHKAIAGMFIECILKFTESKILPYDLNELMDDSIF 625

  Fly   465 VHLP-LSWFSNSWLILGLYFTTFF------FGLAIVPALYF-------HWTKRDKLPIGQRVQL 514
            .:|| |....|..|::|.. |.:.      |.|.....|..       :.:|.::||.|.||.:
 Worm   626 EYLPKLEDRLNKTLMIGTK-TDYLLDAQKQFKLLQKTVLELSEIVQRRNVSKLEELPFGSRVDI 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11961NP_725876.1 M28_Fxna_like 91..395 CDD:349872 54/251 (22%)
MFS <539..>658 CDD:475125
gcp-2.2NP_509928.3 Zinc_peptidase_like 78..>133 CDD:472712
PA_GCPII_like 137..364 CDD:239036
M28_PSMA_like 363..614 CDD:349942 66/312 (21%)
TFR_dimer 646..773 CDD:461238 9/43 (21%)
Blue background indicates that the domain is not in the aligned region.

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