DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EndoB and Sh3rf3

DIOPT Version :10

Sequence 1:NP_611410.1 Gene:EndoB / 37218 FlyBaseID:FBgn0034433 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_766376.2 Gene:Sh3rf3 / 237353 MGIID:2444637 Length:878 Species:Mus musculus


Alignment Length:293 Identity:55/293 - (18%)
Similarity:96/293 - (32%) Gaps:104/293 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 DGEMKTIGKERGILETKRLDLDACKNRVKKARSMLGQQSKDGISPEAVLEQAERDLRV--AQAEF 216
            :||.:...::||.......|:|        ..|:|     |.:.....||:.:...:|  .|..|
Mouse    21 EGEDRQGEQQRGAQARTEEDMD--------ESSLL-----DLLECSVCLERLDTTAKVLPCQHTF 72

  Fly   217 DRQAEITKLLLDGISTSQASHLRHLHAFIQTQVRYYKQCG--------------DVMEQLQRELA 267
            .|:.      |:.|..|:       |.....:.|....||              |.:.|..|..|
Mouse    73 CRRC------LESIVCSR-------HELRCPECRILVGCGVDELPANILLVRLLDGIRQRPRTGA 124

  Fly   268 NLGGPTPYIPLDVNEASASKSNISSGAAARGPGNNHSANMAATGHKPNQPMHVST---------- 322
            :.|...|..|     ...:.|.::.||.            .|||..|..|:.:|.          
Mouse   125 SPGSSPPARP-----GPGTFSALAGGAG------------GATGSPPCSPVFLSAAAGSSTSSLC 172

  Fly   323 --------------DQMQRARVLCSYDAKDHTELNLSANEVIFVTECSPVNEDYMYGKQGLLKGL 373
                          .|:..|:.|.||:.|:..:|..:..::|.:..  .|:|::.:|:...:.|.
Mouse   173 DVATNRSVPVAKTLSQLPYAKALYSYEGKEPGDLKFNKGDIIILRR--KVDENWYHGELQGMHGF 235

  Fly   374 VPRAFV-------------------EMLDEEHD 387
            :|.:::                   ||.|.:.|
Mouse   236 LPASYIQCVRPLPQALPQGKALYDFEMKDRDQD 268

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EndoBNP_611410.1 BAR_Endophilin_B 26..266 CDD:153278 25/127 (20%)
SH3_Endophilin_B 327..378 CDD:212736 12/50 (24%)
Sh3rf3NP_766376.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..40 4/18 (22%)
RING-HC_SH3RF3 48..93 CDD:438408 11/57 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..145 6/29 (21%)
SH3 190..243 CDD:473055 12/54 (22%)
SH3 253..307 CDD:473055 4/16 (25%)
Interaction with RAC1. /evidence=ECO:0000250|UniProtKB:Q8TEJ3 364..433
SH3_SH3RF3_3 461..517 CDD:212858
Herpes_BLLF1 <543..>818 CDD:282904
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 574..659
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 688..758
SH3_SH3RF_C 823..877 CDD:212719
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.