DRSC/TRiP Functional Genomics Resources

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Protein Alignment EndoB and Sh3gl2

DIOPT Version :10

Sequence 1:NP_611410.1 Gene:EndoB / 37218 FlyBaseID:FBgn0034433 Length:390 Species:Drosophila melanogaster
Sequence 2:NP_446387.1 Gene:Sh3gl2 / 116743 RGDID:620276 Length:352 Species:Rattus norvegicus


Alignment Length:394 Identity:92/394 - (23%)
Similarity:157/394 - (39%) Gaps:68/394 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 NVKNLVKEAGSTISRVVQLTEEKLGTTERTEYDLHFQNLAERADVTKTWTEKIVRDTESVLIPNP 73
            :|..|.|:    ..:..|...||:|..|.|:.|..|:.:..:.|||.....:|:..|...|.|||
  Rat     2 SVAGLKKQ----FHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNP 62

  Fly    74 QNRVEDFIFEKIEK----SKPKRLSNLEHLALD-MIEAGGDFGQDLPYGQALIKVGQAEQKLGQC 133
            .:|.:..:...:.|    .|.......|.|..: |::.|.:.|.|..:|.||.:||:|.::|.:.
  Rat    63 ASRAKLSMINTMSKIRGQEKGPGYPQAEALLAEAMLKFGRELGDDCNFGPALGEVGEAMRELSEV 127

  Fly   134 EHDFIATSGICFTQPLRKFLDGEMKTIGKERGILETKRLDLDACKNRVKKARSMLGQQSKDGISP 198
            :..........|..||:...|.:::.|......||.:|||.|..|.|..|.              
  Rat   128 KDSLDMEVKQNFIDPLQNLHDKDLREIQHHLKKLEGRRLDFDYKKKRQGKI-------------- 178

  Fly   199 EAVLEQAERDLRVAQAEFDRQAEITKLLLDGISTSQASHLRHLHAFIQTQVRYYKQCGDVMEQL- 262
                  .:.:||.|..:||...||.:..:..:.......:..|.|.:|.|:.|:||...:::|: 
  Rat   179 ------PDEELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQILQQVT 237

  Fly   263 --------------QRELANLGGPTPYIPLDVNEASASKSNISSGAAARGPGNNHSANMAATGHK 313
                          :||..    |.|.:.|:.               |.|.|...:..::.||  
  Rat   238 VRLEERIRQASSQPRREYQ----PKPRMSLEF---------------ATGDGTQPNGGLSHTG-- 281

  Fly   314 PNQPMHVSTDQMQRARVLCSYDAKDHTELNLSANEVIFVTECSPVNEDYMYGKQGLLKGLVPRAF 378
            ..:|..|..|| ...|.|..::.::..||.....::|.:|  :.::|::..|......|..|..:
  Rat   282 TPKPAGVQMDQ-PCCRALYDFEPENEGELGFKEGDIITLT--NQIDENWYEGMLHGQSGFFPINY 343

  Fly   379 VEML 382
            ||:|
  Rat   344 VEIL 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EndoBNP_611410.1 BAR_Endophilin_B 26..266 CDD:153278 63/259 (24%)
SH3_Endophilin_B 327..378 CDD:212736 10/50 (20%)
Sh3gl2NP_446387.1 Binds and tubulates liposomes 1..125 35/126 (28%)
Membrane-binding amphipathic helix 1..21 5/22 (23%)
BAR_Endophilin_A1 25..247 CDD:153297 58/241 (24%)
Required for dimerization upon membrane association 60..87 6/26 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 246..289 11/63 (17%)
SH3_Endophilin_A 293..347 CDD:212737 12/55 (22%)

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