DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment botv and Extl3

DIOPT Version :10

Sequence 1:NP_523790.1 Gene:botv / 37198 FlyBaseID:FBgn0027535 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_064482.1 Gene:Extl3 / 56819 RGDID:62065 Length:919 Species:Rattus norvegicus


Alignment Length:986 Identity:474/986 - (48%)
Similarity:630/986 - (63%) Gaps:110/986 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 GSGGGNEACAPNSSSAQIRHSMGFRTSWMRQFRRYKLPMVLLMLLFLVSCLAYRILSVEQDAPPL 84
            |.|.|.:.|       .:|.|...|.:|        |...|.::|.....:|:..|:...:|.  
  Rat    11 GVGNGGQTC-------MLRWSNRIRLTW--------LSFTLFIILVFFPLIAHYYLTTLDEAD-- 58

  Fly    85 DLHRSSPLLDAYEDFSAMRAGDLKMRIE---EMVRIKSTVSVELRELESRRQKLQSDISQYNQKI 146
                     :|.:.....|||:....::   ::.||:.:||.||.:||::||:|.|:|::.|.||
  Rat    59 ---------EAGKRIFGPRAGNELCEVKHVLDLCRIRESVSEELLQLEAKRQELNSEIAKLNLKI 114

  Fly   147 EELKQELLREQTELERLKISVEQAQVAQREAVQRNTPDLALPRSLLPNT----LPRKSNPITGGM 207
            |..|:.:...:.:|.:||..:.|.:.:.:|.:.:|.|.|:||..|||..    ||...  :|.| 
  Rat   115 EACKKSIENAKQDLLQLKNVISQTEHSYKELMAQNQPKLSLPIRLLPEKDDAGLPPPK--VTRG- 176

  Fly   208 AASCEMHNCFNHSRCSLTSGFPVYLYDPDEHSVQRKGYDIDGFLKTTLKQTLGYNAHIVKDPKHA 272
               |.:||||::|||.|||||||::||.|:.:.   |..:|..:|...:.|:..|.::.::...|
  Rat   177 ---CRLHNCFDYSRCPLTSGFPVFVYDSDQFAF---GSYLDPLVKQAFQATVRANVYVTENAAIA 235

  Fly   273 CIYLVLVGEALLEQDLLRNNRYAAQEAEHQQPSTPTLENDCPVDMEK-LYSLPYWGGDGRNHVLL 336
            |:|:|||||.                   |:|:  .|:   |.|:|| |:|||:|..||.|||::
  Rat   236 CLYVVLVGEI-------------------QEPA--VLQ---PADLEKQLHSLPHWRTDGHNHVII 276

  Fly   337 NLARRDLTSHRTNPLYRQNTMRAIVVQSAFEREQFRPGYDLIVPPILGPPGGDVWQECAEMVPAR 401
            ||:|:   |...|.||..:|.||:|.||.|...|:|.|:||:|.|::.......:.|....||.:
  Rat   277 NLSRK---SDTQNLLYNVSTGRAMVAQSTFYAAQYRAGFDLVVSPLVHAMSEPNFMEIPPQVPVK 338

  Fly   402 RKYLLTYQGE-LRPKQSSLNPLDAFILEHLAD--------------MAKGATQDQFVLQFQCVPA 451
            ||||.|:||| :...:|||....:|..|...|              ..:.:..||.:::|.|   
  Rat   339 RKYLFTFQGEKIESLRSSLQEARSFEEEMEGDPPADYDDRIIATLKAVQDSKLDQVLVEFTC--- 400

  Fly   452 TEQQEGDSLP-DWTLCGSDSSRRQLLKDSTFSLILPPLNGRVS---STLMLARIYEALRSGAVPV 512
             :.|...||| :|.|||....|.:|||.|||:||:.|  |..|   |:....|::|||..|||||
  Rat   401 -KNQPKPSLPTEWALCGEREDRLELLKLSTFALIITP--GDPSLLISSGCATRLFEALEVGAVPV 462

  Fly   513 ILGADELRLPYAETVDWRRTALLLPKARITELHFLLRAVQDADLLLLRRQGRLIWERYLSSVQAT 577
            :|| ::::|||.:.:.|...||::||.|:||:|||||::.|:|||.:|||||.:||.|.|:..:.
  Rat   463 VLG-EQVQLPYHDMLQWNEAALVVPKPRVTEVHFLLRSLSDSDLLAMRRQGRFLWETYFSTADSI 526

  Fly   578 VDTVIASLRDRLGIPPRPVPSVIAQSVFNSTFIPLKSDPPVGLDTEPEES----LGPI--EPPYP 636
            .:||:|.:|.|:.||..|:...:|..      ||.:|....|.|....::    |||:  ||||.
  Rat   527 FNTVLAMIRTRIQIPAAPIREEVAAE------IPHRSGKAAGTDPNMADNGDLDLGPVETEPPYA 585

  Fly   637 SPAFRRNYTILRMQAKEAWNDWLDPFYLYPQLPFDPALPSEAKFMGSHTGFRPIGKGLGGAGKEF 701
            ||.:.||:|:.......:||....||:|:|..||||.|||||||:||.|||||||.|.||:||||
  Rat   586 SPKYLRNFTLTVTDCYRSWNSAPGPFHLFPHTPFDPVLPSEAKFLGSGTGFRPIGGGAGGSGKEF 650

  Fly   702 GESLGGNYPREQFTIVMLTYEREQVLMDSLGRLYGLPYLHKVVVVWNSPKPPLDDLRWPDIGVPV 766
            ..:||||..|||||:||||||||:|||:||.||.|||||:||||||||||.|.:||.|||||||:
  Rat   651 QAALGGNVQREQFTVVMLTYEREEVLMNSLERLNGLPYLNKVVVVWNSPKLPSEDLLWPDIGVPI 715

  Fly   767 AVLRAPRNSLNNRFLPFDVIETEAVLSVDDDAHLRHDEILFGFRVWREHRDRVVGFPGRYHAWDL 831
            .|:|..:|||||||||::.|||||:||:|||||||||||:||||||||.|||:|||||||||||:
  Rat   716 MVVRTEKNSLNNRFLPWNEIETEAILSIDDDAHLRHDEIMFGFRVWREARDRIVGFPGRYHAWDI 780

  Fly   832 GNPNGQWHYNSNYSCELSMVLTGAAFVHKYYLYLYTYHLPQAIRDKVDEYMNCEDIAMNFLVSHI 896
              |:..|.||||||||||||||||||.||||.|||:|.:||||||.||||:||||||||||||||
  Rat   781 --PHQSWLYNSNYSCELSMVLTGAAFFHKYYAYLYSYVMPQAIRDMVDEYINCEDIAMNFLVSHI 843

  Fly   897 TRKPPVKVTSRWTFRCPGCPVSLSEDDTHFQERHKCINFFSRVFGYTPLLNTQYRADSILFKTRI 961
            |||||:||||||||||||||.:||.||:||.|||||||||.:|:||.|||.||:|.||:|||||:
  Rat   844 TRKPPIKVTSRWTFRCPGCPQALSHDDSHFHERHKCINFFVKVYGYMPLLYTQFRVDSVLFKTRL 908

  Fly   962 PHDKQKCFKYI 972
            ||||.||||:|
  Rat   909 PHDKTKCFKFI 919

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
botvNP_523790.1 CC_brat-like 106..>179 CDD:475168 23/75 (31%)
Exostosin 224..551 CDD:397245 130/346 (38%)
Glyco_transf_64 714..953 CDD:430488 188/238 (79%)
Extl3NP_064482.1 TPR_MLP1_2 <71..150 CDD:462316 23/78 (29%)
Exostosin 190..500 CDD:397245 130/346 (38%)
Glyco_transf_64 663..900 CDD:430488 188/238 (79%)

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