DRSC/TRiP Functional Genomics Resources

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Protein Alignment botv and Extl1

DIOPT Version :10

Sequence 1:NP_523790.1 Gene:botv / 37198 FlyBaseID:FBgn0027535 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_001101455.1 Gene:Extl1 / 313610 RGDID:1309572 Length:670 Species:Rattus norvegicus


Alignment Length:837 Identity:209/837 - (24%)
Similarity:332/837 - (39%) Gaps:262/837 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 SVEQAQVAQREAVQRNTPDLALPRSLLPNTLPRKSNPITGGMAASCEMHNCFNHSRCSLTSGFPV 230
            |..|.:....|.||:               |||.|.      .:||....||:.|:|   .|..:
  Rat    54 SFSQPETNPEEDVQQ---------------LPRVSR------GSSCTWGACFDTSKC---RGKVL 94

  Fly   231 YLYDPDEHS-------VQRKGYDIDGFLKTTLKQTLGYNAHIVKDPKHACIYLVLVGEALLEQDL 288
            .::   .||       .||:..|           :|..:.:....|..||:.|.|..:       
  Rat    95 KIF---VHSAAGPTTEAQRRILD-----------SLEGSRYYALSPAEACLLLFLPSQ------- 138

  Fly   289 LRNNRYAAQEAEHQQPSTPTLENDC-PVDMEKLYSLPYWGGDGRNHVLLNLARRDLTSHRTNPLY 352
               :|..|                | |:.       |.|.| ||||::|:|.....|        
  Rat   139 ---DRRGA----------------CGPLP-------PNWNG-GRNHLVLSLYPAPCT-------- 168

  Fly   353 RQNTMRAIVVQSAFEREQFRPGYDLIVP------PILGPPGGDVW----QECAEMVPA---RRKY 404
              ...:|:|.:::...:.||||:|:.:|      |:.|...|.:.    |..|.:|..   |.::
  Rat   169 --RLGQAMVAEASPSLDIFRPGFDVALPYLPEAHPLKGGAPGSLQRHGPQPGATLVAVAEERGRW 231

  Fly   405 LLTYQGELRPKQSSLNPLDAFILEHLADMAKGATQDQFVLQFQCVPATEQ-QEGDSLPDWTLCGS 468
            .:|      ...:|..|.|           :...||         |..:| ..|:.||:.|.|  
  Rat   232 RIT------TTHASACPWD-----------RNCEQD---------PGPQQTYPGEILPNVTFC-- 268

  Fly   469 DSSRRQLLKDSTFSLILPPLNGRVSSTLMLARIYEALRSGAVPVILGADELRLPYAETVDWRRTA 533
                           ::|   |..|:|   :...:||::|.:||:| :....||::|.:||.:.|
  Rat   269 ---------------LIP---GHRSAT---SCFLQALQAGCIPVLL-SPRWELPFSEVIDWTKAA 311

  Fly   534 LLLPKARITELHFLLRAVQDADLLLLRRQGRLIWERYLSSVQATVDTVIASLRDRL-GIPPRPVP 597
            ::..:....::...||.:..:.:|.||:|.:.:|..|.|||:..|.|.:..::||: |....|  
  Rat   312 IVADERLPLQVLAALREMLPSRVLALRQQTQFLWTAYFSSVEKVVHTTLEIIQDRIWGASAHP-- 374

  Fly   598 SVIAQSVFNSTFIPLKSDPPVGLDTEPEESLGPIEPPYPSPAFRRNYTILRMQAKEAWNDWLDPF 662
                ..::||        ||..|...|..|                 |.|:        |:  ||
  Rat   375 ----SLMWNS--------PPGALLALPTFS-----------------TSLQ--------DF--PF 400

  Fly   663 YLYPQLPFDPALPSEAKFMGSHTGFRPIGKGLGGAGKEFGESLGGNYPREQFTIVMLTYEREQVL 727
            | :.||                                      |:.|...|:.|:.....|:..
  Rat   401 Y-HLQL--------------------------------------GSSPGSSFSAVIWVGVSEESP 426

  Fly   728 MDSLGRLYGLPYLHKVVVVWNSPKPPLDDLRWPDIGVPVAVLRAPRNSLNNRFLPFDVIETEAVL 792
            ...:..:.|..:..:::::|||.|||.|  |||...||:.|:...| .:::||..:..|.|..:|
  Rat   427 PKLIQEVAGSRHCAQILILWNSEKPPPD--RWPKTAVPLTVIEGHR-KVSDRFFLYSNISTNVIL 488

  Fly   793 SVDDDAHLRHDEILFGFRVWREHRDRVVGFPGRYHAWDLGNPNGQWHYNSNYSCELSMVLTGAAF 857
            |:|..:.|...|:.|.|.||:...:|:|||....|.||.....  |.|::..:.|.|||||.|||
  Rat   489 SLDAQSTLSTSEVDFAFVVWQSFPERMVGFVTWSHFWDEARQG--WGYSAEMANEFSMVLTTAAF 551

  Fly   858 VHKYYLYLYTYHLPQAIRDKVDEYMNCEDIAMNFLVSHITRKPPVKV------------TSRWTF 910
            .|:||..|:|:.||:|:|...||...|.||.|||||:.:|:.||:||            .|....
  Rat   552 YHRYYHTLFTHSLPKALRSIADETPTCVDILMNFLVATVTKLPPIKVPYSRQHQEAAPMASEGPR 616

  Fly   911 RCPGCPVSLSEDDTHFQERHKCINFFSRVFGYTPLLNTQYRADSILFKTRIPHDKQK 967
            ..|. |.:|.:|         |||..:...|:.||::::.|.|.:|||..:...::|
  Rat   617 PVPE-PQALDQD---------CINRLAAGLGHMPLVSSRVRLDPVLFKDPVSVQRKK 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
botvNP_523790.1 CC_brat-like 106..>179 CDD:475168 3/12 (25%)
Exostosin 224..551 CDD:397245 72/348 (21%)
Glyco_transf_64 714..953 CDD:430488 85/250 (34%)
Extl1NP_001101455.1 Exostosin 108..329 CDD:397245 69/325 (21%)
Glyco_transf_64 413..649 CDD:430488 85/250 (34%)

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