DRSC/TRiP Functional Genomics Resources

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Protein Alignment botv and rib-2

DIOPT Version :10

Sequence 1:NP_523790.1 Gene:botv / 37198 FlyBaseID:FBgn0027535 Length:972 Species:Drosophila melanogaster
Sequence 2:NP_499368.1 Gene:rib-2 / 176502 WormBaseID:WBGene00004361 Length:814 Species:Caenorhabditis elegans


Alignment Length:945 Identity:321/945 - (33%)
Similarity:475/945 - (50%) Gaps:179/945 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 VLLMLLFLVSCLAYRILS---------VEQDAPPLDLHRSSPLLDAYEDFSAMRAG-DLKMRIEE 113
            |...|:|:...:.|.|:.         :.|||    |.::...||   |:.|..:| .:...:.|
 Worm    18 VSAFLIFIFFVITYIIIYNVSFSEPSWITQDA----LKQNIENLD---DYDASCSGYSIGRILRE 75

  Fly   114 MVRIKSTVSVELRELESRRQKLQSDISQYNQKIEELKQELLREQTELERLKISVEQAQVAQREAV 178
            ..||.::|.:||.|       .|..|.:.....|||::.:.::|.||..|:..:|.||....|..
 Worm    76 QKRILASVRLELTE-------SQVKIEEIRTVQEELQRLIPQKQLELSALEGEIEAAQRQLEELR 133

  Fly   179 QRNTPDLALPRSLLPNTLPRK-SNPITGGMAASCEMHNCFNHSRCSLTSGFPVYLYDPDEHSVQR 242
            :.....:.||.|  |..:||: ..|   ...:..::.:..::||||::|..|||:      .:..
 Worm   134 ETQNVKVFLPFS--PLQIPRELEQP---SQISPNQLDDIIDYSRCSISSFMPVYV------DIIT 187

  Fly   243 KGYDIDGFLKTTLKQTLGYNAHIVKDPKHACI-----------------YLVLVGEALLEQDLLR 290
            .|.....:| ...::.:   .::|:.|..|||                 .|..||..::.     
 Worm   188 SGQSEKEWL-NVFQEVI---PNLVETPDKACIKIHISNGIASPNTTFNSILFNVGSPIIN----- 243

  Fly   291 NNRYAAQEAEHQQPSTPTLENDCPVDMEKLYSLPYWGGDGRNHVLLNLARRDLTSHRTNPLYRQN 355
                ...::.|.|.| .....|.|||:              ||:.:.  :.|||.  ..|..|:|
 Worm   244 ----FQSKSIHVQAS-KIRSFDFPVDV--------------NHIAVE--KVDLTP--LLPFQREN 285

  Fly   356 TMRAIVVQSAFEREQFRPGYDLIVPPILGPPGGDVWQECAEMVPARRKYLLTYQGELRPKQSSLN 420
            .:..||..:......|                     ......|:||..::.             
 Worm   286 LISLIVDNTELNFSAF---------------------SSLSAEPSRRPIVIV------------- 316

  Fly   421 PLDAFILEHLADMAKGATQDQFVLQFQCVPATEQQEGDSLPDWTLCGSDSSRRQLLKDSTFSLIL 485
                                      :|     .||..||         ..||||:..|||..:|
 Worm   317 --------------------------KC-----SQENCSL---------ERRRQLIGSSTFCFLL 341

  Fly   486 PPLNGRVSSTLMLARIYEALRSGAVPVILGADELRLPYAETVDWRRTALLLPKARITELHFLLRA 550
            |       |.:.......:|:.|.:|:||...:| ||:.:.:||||....||.||:.|.||::::
 Worm   342 P-------SEMFFQDFLSSLQLGCIPIILSNSQL-LPFQDLIDWRRATYRLPLARLPEAHFIVQS 398

  Fly   551 VQDADLLLLRRQGRLIWERYLSSVQATVDTVIASLRDRLGIPPRPVPSVIAQSVFNSTF-IPLKS 614
            .:.:|::.:||.|||.:|.||:.......:::|:||.:|.||.|.|....|..:|||:| .|..|
 Worm   399 FEISDIIEMRRVGRLFYETYLADRHLLARSLLAALRYKLQIPTREVRRNQAIPLFNSSFTAPKGS 463

  Fly   615 DPPVGLDTEPEESLGPIEPPYPSPAFRRNYTILRMQAKEAWNDWLDPFYLYPQLPFDPALPSEAK 679
            ...|..:.:.|..|||:|....|.::..|:|..::.:.:.||..:.|.|....|.....||:||:
 Worm   464 VVNVQANFDDEYLLGPLESRVESTSYAYNFTEFQLYSYDFWNIIMSPHYTKEFLVNAAELPTEAE 528

  Fly   680 FM-GSHTGFRPIGKGLGGAGKEFGESLGGNYPREQFTIVMLTYEREQVLMDSLGRLYGLPYLHKV 743
            |. .:..|||||..   |:|.||.::||||..|||||:|:|||||:.||..:|.||:.||||:|:
 Worm   529 FFEDTKIGFRPIEP---GSGAEFSKALGGNRQREQFTVVLLTYERDAVLTGALERLHQLPYLNKI 590

  Fly   744 VVVWNS-PKPPLDDLRWPDIGVPVAVLRAPRNSLNNRFLPFDVIETEAVLSVDDDAHLRHDEILF 807
            :||||: .:.|.|  .||.:.:||..:|...|:|||||:|:|.||||||||:|||..|...||:.
 Worm   591 IVVWNNVNRDPPD--TWPSLHIPVEFIRVAENNLNNRFVPWDRIETEAVLSLDDDIDLMQQEIIL 653

  Fly   808 GFRVWREHRDRVVGFPGRYHAWDLGNPNGQWHYNSNYSCELSMVLTGAAFVHKYYLYLYTYHLPQ 872
            .||||||:|||:||||.|:||    .......||||::|::||:||||||:||.||..|||.:|.
 Worm   654 AFRVWRENRDRIVGFPARHHA----RYGDSMFYNSNHTCQMSMILTGAAFIHKNYLTAYTYEMPA 714

  Fly   873 AIRDKVDEYMNCEDIAMNFLVSHITRKPPVKVTSRWTFRCPGCPVSLSEDDTHFQERHKCINFFS 937
            .||:.|:...||||||||:||||:|||||:|.|||||.:||.|..||.::.|||::||:|:..|:
 Worm   715 EIREHVNSIKNCEDIAMNYLVSHLTRKPPIKTTSRWTLKCPTCTESLYKEGTHFEKRHECMRLFT 779

  Fly   938 RVFGYTPLLNTQYRADSILFKTRIPHDKQKCFKYI 972
            :::||.||..:|:||||||||||:|.:.||||||:
 Worm   780 KIYGYNPLKFSQFRADSILFKTRLPQNHQKCFKYV 814

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
botvNP_523790.1 CC_brat-like 106..>179 CDD:475168 20/72 (28%)
Exostosin 224..551 CDD:397245 69/343 (20%)
Glyco_transf_64 714..953 CDD:430488 132/239 (55%)
rib-2NP_499368.1 GumC <49..>162 CDD:442439 34/131 (26%)
RXYLT1-like 175..399 CDD:473306 69/343 (20%)
Glyco_transf_64 561..795 CDD:430488 132/239 (55%)

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