DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18605 and Topors

DIOPT Version :10

Sequence 1:NP_001188974.1 Gene:CG18605 / 37189 FlyBaseID:FBgn0034411 Length:415 Species:Drosophila melanogaster
Sequence 2:NP_001102128.1 Gene:Topors / 362501 RGDID:1305270 Length:1042 Species:Rattus norvegicus


Alignment Length:436 Identity:92/436 - (21%)
Similarity:169/436 - (38%) Gaps:90/436 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 MVQWRIYVYANSLYSLPDRETGDFRGWSPEYFRLNPFEVHRVMMWVNRDVSVLIRTRKADIFYLY 70
            ::.:|..:|...:......:.|.:|..|.|:||.||..:||::.|:.|:::||.....:.:..:.
  Rat   257 IINFRRTLYRAGVRVRSIEDGGRYRDISAEFFRRNPACLHRLVPWLKRELTVLFGAHGSLVNIVQ 321

  Fly    71 ETIKNLLPRLKLDSEEFRKPMIHFFGANTDLFIHELINFARSPYDTLMAYECSTQYRALLDFDNG 135
            ..|.:.:.|..|:|:.|...:..|....|:.||||.|:|||||:: :.|::....|      |..
  Rat   322 HIIMSNVTRYDLESQAFVSDLRPFLLNRTEHFIHEFISFARSPFN-MAAFDQHANY------DCP 379

  Fly   136 PTTSAKSRDREFLSTRLHSFVEFTRRINYDDCGGFEADLEL--------EDEDFGELDDMMMERY 192
            |::...||....:.|           |:.|:....|.|:.:        :||..|.......:.:
  Rat   380 PSSEEGSRSDSSVIT-----------ISPDEAEAQELDVNVSTIRQAPWDDETPGPSYSNSEQVH 433

  Fly   193 GGAPFLM----KMDGQLVT---ARIIPSSQANAPNQGQVNQQTQSQAQAQAQAQAQVQAQAQAQA 250
            .|...|:    ..|.:||:   |..|...|||    ..||..:.|.:. .......|:..|:...
  Rat   434 VGVSSLLNSSDSSDEELVSGGAASQIQGVQAN----DDVNNDSDSSSD-NCVIVGFVKPLAERTP 493

  Fly   251 Q-TQAQTQAQALAQAQAQAQVQAQPQAQVQQA-------AAQPAQLLLPQLTQAVIQTQQRAVHQ 307
            : .:..:.::.|...:....|:.|.|.|...:       |:.|..:|                  
  Rat   494 ELVELSSDSEELGSYEKMETVKTQEQEQSYSSGDSDASRASSPRSVL------------------ 540

  Fly   308 PQQSGQQSGPQHASSTAALATPLEDLELGFAIERSMFVGA---SNADQGGDFILPYGQVFRFANT 369
              ...:|.|..|..|...:.:..|:       :||..:..   |::.:|.....||....|....
  Rat   541 --GKDEQMGKSHCDSDTRINSKKEE-------KRSTSLSTPRDSSSTRGDRACSPYNHRHRKGGR 596

  Fly   370 NRAARPSNGNGSGSGVMNPPPAPPVPNNPRNASAHQGRRRRTQNQR 415
            :|::...:.:.||             ::.||...|.| ::|.:|:|
  Rat   597 SRSSDSRSQSRSG-------------HDQRNHRKHHG-KKRLKNKR 628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18605NP_001188974.1 None
ToporsNP_001102128.1 RING-HC_Topors 101..146 CDD:438236
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.