DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS and ARC1

DIOPT Version :10

Sequence 1:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:NP_011410.1 Gene:ARC1 / 852773 SGDID:S000003073 Length:376 Species:Saccharomyces cerevisiae


Alignment Length:125 Identity:35/125 - (28%)
Similarity:51/125 - (40%) Gaps:30/125 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   842 LKASTKDKAIWQPEVTKLLDLKKQLEEAKKKT-ATAAAPAATPAPSNGSQSVQDLEKAIQEQGDK 905
            |:.|:.||.    |:...|||..::.|.|||. |..||.||..|.       :|:.|        
Yeast   109 LEVSSTDKL----EINHDLDLPHEVIEKKKKAPAGGAADAAAKAD-------EDVSK-------- 154

  Fly   906 VRKLKGSTKDKTVWQPEVNILLDLKKQLEAVQKAAKAAPA------ANAAPAASPAATAD 959
                |...:|....:|:...|..|:::.:|.:.|.|||.|      .|.||.....:..|
Yeast   155 ----KAKKQDHPRGKPDEETLKKLREEAKAKKAAKKAANAKQQQEQQNKAPEKPKPSAID 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GST_N_5 1..70 CDD:436537
GST_C_family 63..164 CDD:470672
PLN02610 248..>850 CDD:215329 3/7 (43%)
MetRS_RNA 895..938 CDD:238475 7/42 (17%)
MetRS_RNA 966..1009 CDD:238475
ARC1NP_011410.1 GST_C_Arc1p_N_like 22..119 CDD:198337 4/13 (31%)
PLN02610 <193..376 CDD:215329 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.

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