DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS and aimp1a

DIOPT Version :10

Sequence 1:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:NP_001039316.1 Gene:aimp1a / 562232 ZFINID:ZDB-GENE-060825-144 Length:315 Species:Danio rerio


Alignment Length:234 Identity:52/234 - (22%)
Similarity:83/234 - (35%) Gaps:95/234 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   778 TLLLPAGHQIGKPAPLFAKLEQSFIDELKGKYGGAQATNDAAHSQISAADLEKAVQAQADKVREL 842
            :|...:||     .|...:|||                        .||:.|:.::....:|:.|
Zfish     6 SLFKMSGH-----TPSLMRLEQ------------------------KAAEAEQIIEYLKQQVQLL 41

  Fly   843 KASTKDKAIWQ---PEVTKLL----DLKKQLEEAKKKTATAAAPAATPAPSNGSQSVQDLEKAIQ 900
                |:|||.|   .|..||:    .|||.:||.||                     |.|:|   
Zfish    42 ----KEKAIVQATLKEEKKLMVENAKLKKDIEELKK---------------------QLLDK--- 78

  Fly   901 EQGDKVRKLKGSTKDKTVWQPEVNILLDLKK---QLEAVQKAAKAAPAANAAPAASPAATA---- 958
                  .|::|              ::|:..   .::.|.|...|.|..:|:|:|:...|.    
Zfish    79 ------EKMRG--------------VIDVPSTEFSVQCVSKPTSADPPVSASPSAASTKTPSAKN 123

  Fly   959 --DAAKVKALEDKIAQQAEKVRTLKATGDAAVWKPEVDI 995
              :|.|:||  :|..::.||........||.|....:|:
Zfish   124 NDEAKKMKA--EKKGEKKEKKAAAPPQEDAKVDVSRLDL 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GST_N_5 1..70 CDD:436537
GST_C_family 63..164 CDD:470672
PLN02610 248..>850 CDD:215329 13/71 (18%)
MetRS_RNA 895..938 CDD:238475 6/45 (13%)
MetRS_RNA 966..1009 CDD:238475 7/30 (23%)
aimp1aNP_001039316.1 ATP-synt_Fo_b <5..81 CDD:473877 30/137 (22%)
PLN02610 <107..315 CDD:215329 15/56 (27%)
Blue background indicates that the domain is not in the aligned region.

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