DRSC/TRiP Functional Genomics Resources

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Protein Alignment: MetRS and aimp1

Sequence 1:NP_611382.1 Gene:MetRS FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:XP_012818679.1 Gene:aimp1 XenbaseID:XB-GENE-958442 Length:313 Species:Xenopus tropicalis

Alignment Length:234 Identity:53/235 (23%)
Similarity:81/235 (34%) Gaps:109/235 (46%)


  Fly   834 AQADKVRE-LK---ASTKDKAIWQP---EVTKL----LDLKKQLE---------EAKKKTATAAA 878
            |:||::.| ||   |..|:|||.|.   |..||    ..|||::|         |.|........
 Frog    25 AEADQIIEYLKQQVALLKEKAILQASLREEKKLRVENAKLKKEIETLKEQLVKTEVKNGVKQIGI 89

  Fly   879 PAAT----------------------PAPSNGSQSVQDLEKAIQEQGDKVRKLKGSTKDKTVWQP 921
            ||:|                      |||.:|.      ||..:|:.:|    ||..|:|     
 Frog    90 PASTSADSSASIPVSAPQPPPVKSSPPAPKSGE------EKKKKEKPEK----KGEKKEK----- 139

  Fly   922 EVNILLDLKKQLEAVQKAAKAAPAANAAPAASPAATADAAKVKALE-DKIAQQAEKVRTLKATGD 985
                                           .|||:.|  ::||:: .::..:...:.|.|...|
 Frog   140 -------------------------------KPAASED--EIKAVDVSRLDLRVGCIVTAKKHPD 171

  Fly   986 A-AVWKPEVDI-----------------LLSLKNELAAL 1006
            | :::..|||:                 |..::|.:|.|
 Frog   172 ADSLYVEEVDVGEATPRTVVSGLVKHIPLEQMQNRMAVL 210

Known Domains:


GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GstA 1..175 CDD:223698
GST_N_family 1..65 CDD:238319
GST_C_family 63..164 CDD:295467
PRK12268 254..812 CDD:237029
MetRS_core 255..625 CDD:173907
Anticodon_Ia_Met 634..763 CDD:153411
MetRS_RNA 828..868 CDD:238475 19/54 (35%)
MetRS_RNA 895..938 CDD:238475 8/43 (19%)
MetRS_RNA 966..1009 CDD:238475 11/61 (18%)
aimp1XP_012818679.1 DUF972 28..>86 CDD:283750 19/58 (33%)
tRNA_bind_EMAP-II_like 151..253 CDD:239198 11/61 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG0143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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