DRSC/TRiP Functional Genomics Resources

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Protein Alignment: MetRS and aimp1b

Sequence 1:NP_611382.1 Gene:MetRS FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:XP_021325469.1 Gene:aimp1b ZFINID:ZDB-GENE-041212-13 Length:346 Species:Danio rerio

Alignment Length:210 Identity:45/211 (21%)
Similarity:76/211 (36%) Gaps:46/211 (22%)


  Fly   847 KDKAIWQPEV---TKLL-----------DLKKQLEEAKKKTAT--------AAAPAAT------P 883
            |:||:.|..|   .|||           |||..|::.:|:.|.        :|:.|:|      |
Zfish    76 KEKAMLQASVREEKKLLVENAKLKKDIDDLKNLLQDTQKRKAVKLRQERALSASIASTSAQLGEP 140

  Fly   884 APS-NGSQSVQDLEKAIQEQGDKVRKLKG-STKDKTVWQPEVNI-----------LLDLKKQLEA 935
            ||| :.:.|...........|.:.|:.:| |.:...|...|..:           :||::|..::
Zfish   141 APSTHTAPSATQTHAHTHHDGRRRRERRGVSCESVCVLSREQKLDVSRLDLRVARILDVRKHPDS 205

  Fly   936 VQKAAKAAPAANAAPAASPAATADAAKVKALEDKIAQQAEKVRTLKATGDAAVWKPEVDILLSLK 1000
            .....:.......||....:...:....:.|...:......||::|..|..:..:     ||...
Zfish   206 ESLYVQEVELGEHAPRTVVSGLTNHVPPEQLLGSLVVLLCNVRSVKVRGVQSQAR-----LLCAV 265

  Fly  1001 NELAALTGTPVAGGQ 1015
            |:......||..|.|
Zfish   266 NQERMEPLTPPTGAQ 280

Known Domains:


GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GstA 1..175 CDD:223698
GST_N_family 1..65 CDD:238319
GST_C_family 63..164 CDD:295467
PRK12268 254..812 CDD:237029
MetRS_core 255..625 CDD:173907
Anticodon_Ia_Met 634..763 CDD:153411
MetRS_RNA 828..868 CDD:238475 12/35 (34%)
MetRS_RNA 895..938 CDD:238475 9/55 (16%)
MetRS_RNA 966..1009 CDD:238475 8/43 (19%)
aimp1bXP_021325469.1 PRK12267 <179..346 CDD:330948 18/108 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG0143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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