DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS and MetRS-m

DIOPT Version :10

Sequence 1:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:NP_650348.1 Gene:MetRS-m / 41733 FlyBaseID:FBgn0027083 Length:582 Species:Drosophila melanogaster


Alignment Length:621 Identity:146/621 - (23%)
Similarity:236/621 - (38%) Gaps:127/621 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 ITSALPYVNNVPHLGNIIGCVLSADIYARYS--RSAGYNTLLICGTDEYGTATENKALAENLTPR 320
            :|:.:.|||..||:|::...|: ||.:.||.  |....:..|..||||:||..:..|....:...
  Fly    22 VTTPIFYVNAAPHIGHLYSAVI-ADAHCRYQRLRYPEQDVRLCTGTDEHGTKIQQAASLHGVPVA 85

  Fly   321 EICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVEQLLCQKCDRF 385
            :.||...:.:..::|...|..|.|.|||.......|...::.:...|:|.:.:.....|...:.|
  Fly    86 KYCDDISQRYREVFRSASIQQDDFIRTTEDRHKRAVANFWRTLHTRGHIYSAAYSGWYCVSDETF 150

  Fly   386 LADRFVEGTCPHPGCGYEDARGDQCD-KCGKLVNATELIRPRCKVCNSAPVLRSSDQLFIDLPKA 449
            |.|..:.         .::|.|.:.. :.|..|..||                .::.:| .|.:.
  Fly   151 LTDSQLR---------LDEATGTRYSLESGHPVEWTE----------------ETNYMF-RLSQF 189

  Fly   450 EPQLKEWVDKSEGGWTHNAKV-------ITRAWLKEGLKPRCITRD---LKWGIPVPHEGFEKKV 504
            :..::.|| |:|      |:|       |....|.|.|....::|.   :.|.||||.:  :.:.
  Fly   190 QDDVRHWV-KTE------ARVRPAKFEKILLDTLSEPLPDVSVSRPSNRVHWAIPVPDD--DSQT 245

  Fly   505 FYVWFDAPFGYVSMTKRYTKEYQQWWQPAKGTDVELFQFMAKDNVPFHSVVWPSVLLAINKGHTL 569
            .|||.||...|:|......:::...|.||:       |.:.||.:.||.:.|.:.|||  .|...
  Fly   246 VYVWLDALVNYLSSVGYPDEKFSAHWPPAQ-------QVIGKDILKFHGIYWTAFLLA--AGLEP 301

  Fly   570 VSHIMATEYLNYEDGKFSKSRGIGVFGNDAQE----TGIPADVWRFYLASARPEGQDSSFSWNDL 630
            ...:....:...:..|.|||:...|....|.:    .|:     |::|........|.::|....
  Fly   302 PGQLYVHSHWTVDGQKMSKSKHNVVDPLQAAQQYTMEGL-----RYFLLREGVAHSDGNYSHVKA 361

  Fly   631 AARNNSELLNNLGNFVNRALVFCEKNFSSTVPGVITTQDELVLLALINRELRGYINSMEKAK-LR 694
            ....||||.:.|||.::||      :..|..||.|......       ..|...:.|::.|| |:
  Fly   362 QRILNSELADTLGNLLSRA------SAKSLNPGQIYPSPSA-------EHLADLLRSLDVAKRLQ 413

  Fly   695 DGVRHL--------------------LAISRHGNGYMQSQQPWVLLKGT-DDQKTRASTIIGLCV 738
            |.:..|                    :|.....|.:.:|.:||.|..|. |..:.|..|||.:.:
  Fly   414 DSLLQLSERCESHYECNHFHLVADTTMAALHAANNFFESSKPWTLKAGAPDGNQARLETIIAMTM 478

  Fly   739 NIACLLANLLFPYMPTTARTLFGQLNAK-------------QTPLNAEKPLVTLLLPAGHQIGKP 790
            :...|...:|.|.:|..|..|..:|:..             .|..|:...      |||  :|:.
  Fly   479 DALRLSGIVLQPIIPQLANRLLDKLSVPTAQRGWNYLAESFATSPNSSNS------PAG--LGES 535

  Fly   791 APL----FAKLEQSFIDELKGKYGGAQATNDAAHSQ 822
            ..|    .|.|.|..::|...|....|....|..|:
  Fly   536 RQLDGQTSALLFQRILEETSAKEVKEQKPQPAKRSK 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GST_N_5 1..70 CDD:436537
GST_C_family 63..164 CDD:470672
PLN02610 248..>850 CDD:215329 146/621 (24%)
MetRS_RNA 895..938 CDD:238475
MetRS_RNA 966..1009 CDD:238475
MetRS-mNP_650348.1 MetG 21..559 CDD:439913 143/607 (24%)
Blue background indicates that the domain is not in the aligned region.

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