DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MetRS and MARS1

DIOPT Version :10

Sequence 1:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:NP_004981.2 Gene:MARS1 / 4141 HGNCID:6898 Length:900 Species:Homo sapiens


Alignment Length:917 Identity:452/917 - (49%)
Similarity:589/917 - (64%) Gaps:65/917 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIIYTNDGNPLGLQLLMLAKFAKQPVQVQLVNLNDAKYKDLLV-------LPTLELDNGLRLFSP 58
            |.::.:||.|..|.:|..|..|:...:|.:..:..   :|.:|       :|.|:||:|..|||.
Human     1 MRLFVSDGVPGCLPVLAAAGRARGRAEVLISTVGP---EDCVVPFLTRPKVPVLQLDSGNYLFST 62

  Fly    59 AAIAKYLFVGKGQQRD----EWLEWSATLLAPALA---HHMAVGHKADANALPVLNALVKKLDDK 116
            :||.:|.|:..|.::|    :||||.||.|.|||:   :::.|..|...:.|..:...:..:|..
Human    63 SAICRYFFLLSGWEQDDLTNQWLEWEATELQPALSAALYYLVVQGKKGEDVLGSVRRALTHIDHS 127

  Fly   117 L--KATPYLAGDKPSAADIAIWSLLAPDGTLKG----AQNVDNLRDWYGRVKALPEVQEVLAEQP 175
            |  :..|:|||:..|.|||.:|..|.|  .|:.    .:.:..|..|:         |.:..::|
Human   128 LSRQNCPFLAGETESLADIVLWGALYP--LLQDPAYLPEELSALHSWF---------QTLSTQEP 181

  Fly   176 LKDLSFNALQQSNRYGGLHHVPL--KRLSLADASKLLVDTTPTVAD--TVTNEEISAAKAAF--- 233
            .:..:...|:|.   |.|...|.  |:...:.|....|...|...:  |::.|||:.|..|:   
Human   182 CQRAAETVLKQQ---GVLALRPYLQKQPQPSPAEGRAVTNEPEEEELATLSEEEIAMAVTAWEKG 243

  Fly   234 TYTAPKEIKEERTVLPKPGERNVLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLI 298
            ..:.|....::..|||..|||||||||||||||||||||||||||||||::|||||...:|||.:
Human   244 LESLPPLRPQQNPVLPVAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYL 308

  Fly   299 CGTDEYGTATENKALAENLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDV 363
            |||||||||||.|||.|.|||:||||||..:|..|||||.|.||.||||||.:||.|.|:.|:.:
Human   309 CGTDEYGTATETKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQL 373

  Fly   364 LKAGYIITESVEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCK 428
            ||.|:::.::||||.|:.|.||||||||||.||.  ||||:||||||||||||:||.||.:|:||
Human   374 LKRGFVLQDTVEQLRCEHCARFLADRFVEGVCPF--CGYEEARGDQCDKCGKLINAVELKKPQCK 436

  Fly   429 VCNSAPVLRSSDQLFIDLPKAEPQLKEWVDKSEGG--WTHNAKVITRAWLKEGLKPRCITRDLKW 491
            ||.|.||::||..||:||||.|.:|:||:.::..|  ||.||:.|||:||::|||||||||||||
Human   437 VCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPRCITRDLKW 501

  Fly   492 GIPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTKEYQQWWQPAKGTDVELFQFMAKDNVPFHSVVW 556
            |.|||.||||.|||||||||..||:|:|..||.::::||:..:  .|:|:||||||||||||:|:
Human   502 GTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKNPE--QVDLYQFMAKDNVPFHSLVF 564

  Fly   557 PSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADVWRFYLASARPEGQ 621
            |...|.....:|||||::|||||||||||||||||:||||:.||:||||||:|||||...|||||
Human   565 PCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIPADIWRFYLLYIRPEGQ 629

  Fly   622 DSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFSSTVPGVITTQDELVLLALINRELRGYIN 686
            ||:|||.||..:||||||||||||:|||.:|..|.|...||.::.|.|:..|||.:..||:.|..
Human   630 DSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSKFFGGYVPEMVLTPDDQRLLAHVTLELQHYHQ 694

  Fly   687 SMEKAKLRDGVRHLLAISRHGNGYMQSQQPWVLLKGTDDQKTRASTIIGLCVNIACLLANLLFPY 751
            .:||.::||.:|.:|.||||||.|:|..:||..:||::..:.||.|:.||.||||.||:.:|.||
Human   695 LLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGSEADRQRAGTVTGLAVNIAALLSVMLQPY 759

  Fly   752 MPTTARTLFGQLNAKQTPLNAEKPLVT---LLLPAGHQIGKPAPLFAKLEQSFIDELKGKYGGAQ 813
            |||.:.|:..||   |.|..|...|:|   ..||||||||..:|||.|||...|:.|:.::||.|
Human   760 MPTVSATIQAQL---QLPPPACSILLTNFLCTLPAGHQIGTVSPLFQKLENDQIESLRQRFGGGQ 821

  Fly   814 ATNDAAHSQISAADLEKAVQAQA---------DKVRELKASTKDKAIWQPEVTKLLDLKKQLEEA 869
            |......:.:......|..|.||         :.||||||...||.....||.|||||||||..|
Human   822 AKTSPKPAVVETVTTAKPQQIQALMDEVTKQGNIVRELKAQKADKNEVAAEVAKLLDLKKQLAVA 886

  Fly   870 KKKTATA 876
            :.|...|
Human   887 EGKPPEA 893

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GST_N_5 1..70 CDD:436537 23/75 (31%)
GST_C_family 63..164 CDD:470672 33/113 (29%)
PLN02610 248..>850 CDD:215329 364/615 (59%)
MetRS_RNA 895..938 CDD:238475
MetRS_RNA 966..1009 CDD:238475
MARS1NP_004981.2 GST_N_5 1..74 CDD:436537 23/75 (31%)
GST_C_MetRS_N 77..179 CDD:198340 31/112 (28%)
PLN02610 251..893 CDD:215329 379/648 (58%)
'HIGH' region 273..283 9/9 (100%)
'KMSKS' region 593..597 3/3 (100%)
Blue background indicates that the domain is not in the aligned region.

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