DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS and AIMP1

DIOPT Version :10

Sequence 1:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:NP_610426.2 Gene:AIMP1 / 35892 FlyBaseID:FBgn0033351 Length:323 Species:Drosophila melanogaster


Alignment Length:207 Identity:42/207 - (20%)
Similarity:72/207 - (34%) Gaps:70/207 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   788 GKPAPLFAKLEQSFID--ELKGKYGGAQATNDAAHSQISAADLEKAVQAQADKVRELKASTK--D 848
            |:....||:.:::..|  ::......|:|..::..::||....:...:.:.:.::|..|..|  :
  Fly    17 GQNCSKFARNKRTMADLQQIASNNERAEALINSIEAEISGIQQQLVERQKQELIKENAALAKEVE 81

  Fly   849 KAIWQPEVTKLLDLKKQL------------------EEAKKKTATAAAPAATPAPSNGSQSVQDL 895
            .|:.|....:|.:.|||:                  .||...||..||||..||           
  Fly    82 AALAQLVQLELRNGKKQIPVPGARGFCTSAAPVVMPAEAGPATAAPAAPAPKPA----------- 135

  Fly   896 EKAIQEQGDKVRKLKGSTKDKTVWQPEVNILLDLKKQLEAVQKAAKAAPAANAAPAASPAATADA 960
             |..:|:..|.:|                                   |||. .|||:|.|..|.
  Fly   136 -KEPKEKKSKEKK-----------------------------------PAAE-KPAAAPEAPVDV 163

  Fly   961 AKVKALEDKIAQ 972
            .::.....||.:
  Fly   164 GRLDLRVGKIVE 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GST_N_5 1..70 CDD:436537
GST_C_family 63..164 CDD:470672
PLN02610 248..>850 CDD:215329 11/65 (17%)
MetRS_RNA 895..938 CDD:238475 4/42 (10%)
MetRS_RNA 966..1009 CDD:238475 2/7 (29%)
AIMP1NP_610426.2 DUF2968 <23..91 CDD:431707 12/67 (18%)
PLN02610 <161..304 CDD:215329 3/15 (20%)
Blue background indicates that the domain is not in the aligned region.

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