DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MetRS and mars1

DIOPT Version :10

Sequence 1:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:XP_068077760.1 Gene:mars1 / 338183 ZFINID:ZDB-GENE-030219-83 Length:942 Species:Danio rerio


Alignment Length:924 Identity:434/924 - (46%)
Similarity:598/924 - (64%) Gaps:73/924 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIIYTNDGNPLGLQLLMLAKFAKQPVQVQLVNLND--AKYKDLLVLPTLELDNGLRLFSPAAIAK 63
            |.::..:|||..|::|...:.:....:.|||...:  ..|....|||.|:|.:|..||||.:|.:
Zfish    30 MKLFIGEGNPHCLKVLAALELSGVRCETQLVKHEEKVVPYLTHPVLPILQLPSGQHLFSPNSICQ 94

  Fly    64 YLFVGKGQQ----RDEWLEWSATLLAPALAHHMAV----GHKADANAL--PVLNALVKKLDDKLK 118
            |||...||:    .::||||.||.|.||:...:.:    |.:.:|.|:  ..|:.|.:.| .|.|
Zfish    95 YLFDISGQKATDATNQWLEWEATNLQPAVLQSLQLVALQGKRVEAAAVMKEPLSWLEQSL-SKRK 158

  Fly   119 ATPYLAGDKPSAADIAIWSLLAP---DGTLKGAQNVDNLRDWYGRVKALPEVQEVLAEQPLKDLS 180
            |: :|..:..|.||:.:|:.|.|   |...:.. ::..:|.|:.||.::...|.. |.:.|:...
Zfish   159 AS-FLTDEVVSVADVVLWAALYPLLSDSAFEPG-DLQAVRGWFERVCSVSACQSA-ALRVLQGKG 220

  Fly   181 FNALQQSNRYGGLHHVPLKRLSLADASKLLVDTTPTVADT---VTNEEISAAKAAFT-----YTA 237
            ..||:...:...:.|.| :|.|.:::::        ..|:   ::.|||..|...::     :|.
Zfish   221 AEALKSFLQKQPVTHTP-RRDSPSNSTE--------AEDSERELSPEEIEEAAQVYSEGLKDFTV 276

  Fly   238 PKEIKEERTVLPKPGERNVLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTD 302
            ..|.|  ..|||:.|:|||||||||||||||||||||||||||||::|||.|..|:|.|.|||||
Zfish   277 VTERK--HPVLPQEGKRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYGRLRGWNLLYICGTD 339

  Fly   303 EYGTATENKALAENLTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAG 367
            ||||||||||..|.|||::|||||..:|.:||:||.|.||:|||||||.||:|.|:.|..:.:.|
Zfish   340 EYGTATENKAREEGLTPQQICDKYHCIHASIYQWFQIDFDFFGRTTTQHQTEIAQDIFWRLHERG 404

  Fly   368 YIITESVEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNS 432
            :::.::||||.|:.|.||||||||||.|||  |.|.:||||||||||:|:||.||..|:||||..
Zfish   405 FLLEDTVEQLRCEGCQRFLADRFVEGECPH--CRYPEARGDQCDKCGRLINAVELKNPQCKVCKE 467

  Fly   433 APVLRSSDQLFIDLPKAEPQLKEWVDKS--EGGWTHNAKVITRAWLKEGLKPRCITRDLKWGIPV 495
            .||:|||..||::|||.|..|::|:..|  .|.||.||:.|||:||::||||||||||||||.||
Zfish   468 TPVIRSSKHLFLNLPKLEQDLEQWLQTSTAAGDWTTNARHITRSWLRDGLKPRCITRDLKWGTPV 532

  Fly   496 PHEGFEKKVFYVWFDAPFGYVSMTKRYTKEYQQWWQPAKGTDVELFQFMAKDNVPFHSVVWPSVL 560
            ||..:::||||||||||.||:|:|..||.::::||:..:  .|||:.|||||||||||||:|..|
Zfish   533 PHPDYKEKVFYVWFDAPIGYLSITANYTDQWERWWKNPQ--QVELYNFMAKDNVPFHSVVFPCSL 595

  Fly   561 LAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADVWRFYLASARPEGQDSSF 625
            |.....:|||::::|||||||||.|||||||:||||:.|::||||:|||||||...|||||||:|
Zfish   596 LGAQDNYTLVNNLIATEYLNYEDTKFSKSRGVGVFGDMAKDTGIPSDVWRFYLLYLRPEGQDSAF 660

  Fly   626 SWNDLAARNNSELLNNLGNFVNRALVFCEKNFSSTVPGVITTQDELVLLALINRELRGYINSMEK 690
            ||.|:|.:||||||||||||:|||.:|..|.|...||.::...|:..|:|.:..||:.||..::|
Zfish   661 SWTDMALKNNSELLNNLGNFINRAGMFVSKFFDGCVPEMLLNDDDKRLIAQVCWELKQYIQLLDK 725

  Fly   691 AKLRDGVRHLLAISRHGNGYMQSQQPWVLLKGTDDQKTRASTIIGLCVNIACLLANLLFPYMPTT 755
            .::||.::.:|.:|||||.|:|..:||..:||..:.:.||.|:.|:.||:|||||.:|.|:|||.
Zfish   726 VRIRDALKCILNMSRHGNQYIQLNEPWKKIKGGAEDRCRAGTVTGVSVNVACLLAAVLEPFMPTV 790

  Fly   756 ARTLFGQLNAKQTPLNAEKPLVT------LLLPAGHQIGKPAPLFAKLEQSFIDELKGKYGGAQA 814
            :.::..||   |.|.::.:.:::      ..|||||:||..:|||.|||...|:.|:.::||.|.
Zfish   791 SLSIRSQL---QAPESSSRAMLSGPGAFICTLPAGHRIGTVSPLFQKLENEQIEALRKRFGGLQT 852

  Fly   815 TND-------------AAHSQIS-AADLEKA------VQAQADKVRELKASTKDKAIWQPEVTKL 859
            .::             |.|:..| .||.|:|      |..|.:|||.|||...:|:....||.||
Zfish   853 PSNSSVAVESKPNAGAAQHTPASVTADPERAKQLTALVAEQGEKVRALKAQKAEKSAIGVEVAKL 917

  Fly   860 LDLKKQLEEAKKKT 873
            ||||.||..|:.||
Zfish   918 LDLKNQLCLAEGKT 931

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GST_N_5 1..70 CDD:436537 24/70 (34%)
GST_C_family 63..164 CDD:470672 35/113 (31%)
PLN02610 248..>850 CDD:215329 346/629 (55%)
MetRS_RNA 895..938 CDD:238475
MetRS_RNA 966..1009 CDD:238475
mars1XP_068077760.1 GST_N_5 30..101 CDD:436537 24/70 (34%)
GST_C_MetRS_N 104..205 CDD:198340 30/103 (29%)
PLN02610 279..917 CDD:215329 352/646 (54%)
Blue background indicates that the domain is not in the aligned region.

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