DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MetRS and LeuRS

DIOPT Version :10

Sequence 1:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:NP_787968.1 Gene:LeuRS / 326262 FlyBaseID:FBgn0284253 Length:1182 Species:Drosophila melanogaster


Alignment Length:1203 Identity:216/1203 - (17%)
Similarity:382/1203 - (31%) Gaps:471/1203 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 AKQPVQV-QLVNLNDAKYKDLLVLPTLELDNGLRLFSPAAIAKYLFVGKGQQRDEWLEWSATLLA 85
            ||...|: |.:.|.|.:.||.     ...::.|..|.|.|:.....:|      ..::|..|.:.
  Fly   155 AKYQWQIMQSLGLKDEEIKDF-----ANAEHWLNYFPPLAVQDLKRIG------VHVDWRRTFIT 208

  Fly    86 PALAHHMAVGHKADANALPVLNALVKKLDDKLK------------------ATPYLAGDKPSAAD 132
                        .|||  |..::.|:...:.||                  ..|.:..|:.|...
  Fly   209 ------------TDAN--PYFDSFVRWQFNHLKERGKIMYGKRYTIYSPKDGQPCMDHDRSSGEG 259

  Fly   133 IA---------------------------IWSLLAPDGTLKGAQNV--------------DNLRD 156
            :.                           :.:.|.|: |:.|..|.              .|...
  Fly   260 VGPQEYTLIKMKVLEVPKALSSIKQPIFMVAATLRPE-TMYGQTNCWLHPDIKYIAWQANKNNEV 323

  Fly   157 WY------------------GRVKALPEV--QEVLA---EQPLKDLSFNALQQSNRYGGLHHVPL 198
            |.                  |.:|.|.||  |::|.   ..||           .::..::.:|:
  Fly   324 WVSTRRAARNMTYQGFTAVEGEIKVLAEVTGQDLLGVPLSAPL-----------TKHKVVYSLPM 377

  Fly   199 KRLSLADASKLLVDTTPTVADTVTNEEISAAKAAFTYTAPKEIKEERTVLPKPGERNVLITSALP 263
              ||:.:      |....|..:|.::      :...|.|..:::::.....|.|.::.::   ||
  Fly   378 --LSIKE------DKGTGVVTSVPSD------SPDDYAALVDLQKKEAFRQKYGLKDEMV---LP 425

  Fly   264 Y----VNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKALAENLTPREICD 324
            |    :..||.||.     ||| ::|       |.||.|      .:..:...|||   .:|:| 
  Fly   426 YEPIPIIEVPTLGK-----LSA-VHA-------YETLKI------QSQNDKDKLAE---AKEMC- 467

  Fly   325 KYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGY-------IITESVEQLLCQKC 382
             |.:   :.|....:...:.||.....:.|: |:...|..:|..       |::.|.::.:...|
  Fly   468 -YLK---SFYDGVMLVGAFAGRKIQDVKKDL-QKRLVDANEADVYYEPEKTIMSRSADECVVALC 527

  Fly   383 DRFL-----------ADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNSAPVL 436
            :::.           |.:.:.|.    ...:|:|| :..:.|...::.        ..|:....|
  Fly   528 NQWYLNYGEPEWQAQATKILHGM----ETFHEEAR-NNFEACLNWLHE--------YACSRTYGL 579

  Fly   437 RSSDQLFIDLPKAEPQLKEWVDKSEGGWTHNAKVITRAWLKE----------------------- 478
            .:.      ||        |.||               ||.|                       
  Fly   580 GTK------LP--------WDDK---------------WLIESLSDSTIYMAFYTVVHLLQGGTF 615

  Fly   479 --------GLKPRCITRDLKWGIPVPHEGFEKKVFYVWF-DAPFGYVSMTKR-----YTKEYQQW 529
                    |:||..:|.:: |.             |::| :.|....:..|:     ..:|::.|
  Fly   616 RGEKPGPFGIKPSDMTGEI-WD-------------YIFFKETPLPKKTAIKQEHLAVLRREFEYW 666

  Fly   530 WQ---PAKGTDVELFQFMAKDNVPF----HSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFS 587
            :.   ...|.|      :.::::.|    |:.:||:......||..:..|::    ||  ..|.|
  Fly   667 YPMDLRVSGKD------LIQNHLTFCLYNHAAIWPNDENKWPKGMRVNGHLL----LN--SAKMS 719

  Fly   588 KSRGIGVFGNDAQETGIPADVWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVF 652
            ||.|..:...:|.:. ..||..|..||.|....:|::|          .|...:.|  :.|...|
  Fly   720 KSDGNFLTLTEAVDK-FSADGMRLCLADAGDSVEDANF----------VESTADAG--ILRLYTF 771

  Fly   653 CE------KNFSSTVPGVITTQDELVLLALINRELR----GYINSMEKAKLRDGVRHL-LAISRH 706
            .|      :|.||...|...|.::.|.|:.:|.:.:    .|...:.|..||.|...| ||..::
  Fly   772 IEWVKEMLENRSSLRKGTDKTFNDQVFLSELNLKTQQTDENYRKMLFKEALRSGFYELQLARDKY 836

  Fly   707 -----GNGYMQSQQPWVLLKGTDDQKTRASTIIGLCVNIACLLANLLFPYMPTTARTLFGQLNAK 766
                 .||..:.                      |.:......|.|:.|..|..|..::|.|..|
  Fly   837 RELCGANGMHED----------------------LVLEFIRRQALLVSPICPHMAEHVWGLLGNK 879

  Fly   767 QTPLNAEKPLV-----------TLLLPAGH------------------------QIGKP------ 790
            ::.::|..|.|           ..|:.|.|                        |..||      
  Fly   880 ESIVHARWPEVGAINEVDILCSEYLMEAAHSFRLNLKNLLQIKGKAGKDKSVNVQAAKPNRGLVW 944

  Fly   791 -APLFAKLEQSFIDELKGKYGGAQATNDAAHSQISAADLE---------KAVQAQADKVRELKAS 845
             |..:...:...:|.:|..:..:||..|   :::.||.|:         |.|...|..:||...|
  Fly   945 VAKTYPPWQCCVLDTMKELFNKSQALPD---NKVIAATLQQKAELKKFMKRVMPFAQMIREKVES 1006

  Fly   846 TKDKAIW---------QPEVTKLLDLKKQLE------------EAKKKTATAAAPAA-----TPA 884
            .|..|..         |..::.|..||..|:            .|.:||.....|.:     :.|
  Fly  1007 GKGVAALAVTLEFDERQVLISNLEYLKNTLDLDVLEIKYTDDPSAPEKTREEVRPGSPFISFSVA 1071

  Fly   885 PSNGSQSVQDLEKA--------------IQEQGDKVRKLKGSTKDKT---VWQ------------ 920
            |:...:....:|::              :|...:|:.|:.|...|..   :|:            
  Fly  1072 PNVSVELTNPIERSSLFQVNTVISEGDTVQSLREKLSKIIGLKTDAATLKIWRYEDPVLGPRKIP 1136

  Fly   921 ------------PEVNILLDLKKQLEAVQKAAK 941
                        .|.|.:||::.:..::::|.|
  Fly  1137 NFEDYKAGKSVLGEGNFVLDVENKKVSLEQAGK 1169

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GST_N_5 1..70 CDD:436537 13/48 (27%)
GST_C_family 63..164 CDD:470672 22/177 (12%)
PLN02610 248..>850 CDD:215329 142/734 (19%)
MetRS_RNA 895..938 CDD:238475 11/83 (13%)
MetRS_RNA 966..1009 CDD:238475
LeuRSNP_787968.1 PLN02959 1..1068 CDD:215518 201/1100 (18%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.