DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS and Mars1

DIOPT Version :10

Sequence 1:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:NP_001165053.1 Gene:Mars1 / 216443 MGIID:1345633 Length:910 Species:Mus musculus


Alignment Length:979 Identity:453/979 - (46%)
Similarity:601/979 - (61%) Gaps:132/979 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIIYTNDGNPLGLQLLMLAKFAKQPVQVQLVNLNDAKYKDLLV-------LPTLELDNGLRLFSP 58
            |.::.::|:|..|.:|..|..|:...::.:..:..   ::.:|       :|.|:||:|..|||.
Mouse     1 MRLFVSEGSPGSLPVLAAAARARGRAELLISTVGP---EECVVPFLTRPKVPVLQLDSGNYLFSA 62

  Fly    59 AAIAKYLFVGKGQQRD----EWLEWSATLLAPALA---HHMAVGHKADANALPVLNALVKKLDDK 116
            :||.:|.|:..|.::|    :||||.||.|.|.|:   |.:.|..|...:.|..|..::..:|..
Mouse    63 SAICRYFFLLCGWEQDDLTNQWLEWEATELQPVLSAALHCLVVQGKKGEDILGPLRRVLTHIDHS 127

  Fly   117 L--KATPYLAGDKPSAADIAIWSLLAPDGTLKG----AQNVDNLRDWYGRVKALPEVQEVLAEQP 175
            |  :..|:||||..|.|||.:|..|.|  .|:.    .:.:..|:.|:         |.:..::|
Mouse   128 LSRQNCPFLAGDTESLADIVLWGALYP--LLQDPAYLPEELGALQSWF---------QTLSTQEP 181

  Fly   176 LKDLSFNALQQSNRYGGLHHVPLKRLSLADASKLLVDTTP----------TVAD--------TVT 222
            .:..:...|:|.   |.|            |.:|.:...|          ||::        |::
Mouse   182 CQRAAETVLKQQ---GVL------------ALRLYLQKQPQPQPPPPEGRTVSNELEEEELATLS 231

  Fly   223 NEEISAAKAAF---TYTAPKEIKEERTVLPKPGERNVLITSALPYVNNVPHLGNIIGCVLSADIY 284
            .|:|..|.||:   ..:.|....::..|||.||||||||||||||||||||||||||||||||::
Mouse   232 EEDIVTAVAAWEKGLESLPPLKLQQHPVLPVPGERNVLITSALPYVNNVPHLGNIIGCVLSADVF 296

  Fly   285 ARYSRSAGYNTLLICGTDEYGTATENKALAENLTPREICDKYFELHNAIYRWFGIGFDYFGRTTT 349
            |||.|...:|||.:|||||||||||.||:.|.||||||||||..:|..|||||||.||.||||||
Mouse   297 ARYCRLRQWNTLYLCGTDEYGTATETKAMEEGLTPREICDKYHAIHADIYRWFGISFDTFGRTTT 361

  Fly   350 QEQTDIVQEAFKDVLKAGYIITESVEQLLCQKCDRFLADRFVEGTCPHPGCGYEDARGDQCDKCG 414
            .:||.|.|:.|:.:|..|:::.::||||.|::|.||||||||||.||.  ||||:|||||||:||
Mouse   362 PQQTKITQDIFQRLLTRGFVLRDTVEQLRCERCARFLADRFVEGVCPF--CGYEEARGDQCDRCG 424

  Fly   415 KLVNATELIRPRCKVCNSAPVLRSSDQLFIDLPKAEPQLKEWVDKSEGG--WTHNAKVITRAWLK 477
            ||:||.||.:|:||:|.|.||:|||..||:||||.|.:|::|:.|:..|  ||.||:.|.|:||:
Mouse   425 KLINAIELKKPQCKICRSCPVVRSSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLR 489

  Fly   478 EGLKPRCITRDLKWGIPVPHEGFEKKVFYVWFDAPFGYVSMTKRYTKEYQQWWQPAKGTDVELFQ 542
            :||||||||||||||.|||.||||.|||||||||..||||:|..||.::::||:..:  .|:|:|
Mouse   490 DGLKPRCITRDLKWGTPVPLEGFEDKVFYVWFDATIGYVSITANYTDQWEKWWKNPE--QVDLYQ 552

  Fly   543 FMAKDNVPFHSVVWPSVLLAINKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPAD 607
            ||||||||||.:|:|..:|.....:|||.||:||||||||||||||||||||||:.|::||||||
Mouse   553 FMAKDNVPFHGLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIPAD 617

  Fly   608 VWRFYLASARPEGQDSSFSWNDLAARNNSELLNNLGNFVNRALVFCEKNFSSTVPGVITTQDELV 672
            :|||||...|||||||:|||.||..:||||||||||||:|||.:|..|.|...||.:..|.|:..
Mouse   618 IWRFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSKFFGGCVPEMALTPDDRR 682

  Fly   673 LLALINRELRGYINSMEKAKLRDGVRHLLAISRHGNGYMQSQQPWVLLKGTDDQKTRASTIIGLC 737
            |:|.::.||:.|...:||.::||.:|.:|.||||||.|:|..:||..:||.:..:.||.|:.|:.
Mouse   683 LVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWKRIKGGEMDRQRAGTVTGMA 747

  Fly   738 VNIACLLANLLFPYMPTTARTLFGQLNAKQTPLNAEKPLVT---LLLPAGHQIGKPAPLFAKLEQ 799
            ||:|.||:.:|.|||||.:.|:..||   |.|..|.:.|.|   ..|||||:||..:|||.|||.
Mouse   748 VNMAALLSVMLQPYMPTVSSTIQTQL---QLPPAACRILATSFICTLPAGHRIGTVSPLFQKLEN 809

  Fly   800 SFIDELKGKYGGAQATNDAAHSQISAADLEKAVQAQADKVRELKASTKDKAIWQPEVTKLLDLKK 864
            ..|:.|:.::||.|              ||:::        ||||....|               
Mouse   810 DQIENLRQRFGGGQ--------------LEESL--------ELKAKGSPK--------------- 837

  Fly   865 QLEEAKKKTATAAAPAATPAPSNGSQSVQDLEKAIQEQGDKVRKLKGSTKDKTVWQPEVNILLDL 929
                      .||..|.|.|   |||.:|.|...:.:||:.||:||....||.....||..||||
Mouse   838 ----------PAAVEAVTAA---GSQHIQTLTDEVTKQGNVVRELKAQKADKNQVAAEVAKLLDL 889

  Fly   930 KKQL 933
            ||||
Mouse   890 KKQL 893

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GST_N_5 1..70 CDD:436537 20/75 (27%)
GST_C_family 63..164 CDD:470672 35/113 (31%)
PLN02610 248..>850 CDD:215329 352/606 (58%)
MetRS_RNA 895..938 CDD:238475 19/39 (49%)
MetRS_RNA 966..1009 CDD:238475
Mars1NP_001165053.1 GST_N_5 1..74 CDD:436537 20/75 (27%)
GST_C_MetRS_N 77..179 CDD:198340 33/112 (29%)
PLN02610 258..>848 CDD:215329 359/646 (56%)
'HIGH' region 275..285 9/9 (100%)
'KMSKS' region 595..599 3/3 (100%)
MetRS_RNA 855..899 CDD:238475 19/39 (49%)
Blue background indicates that the domain is not in the aligned region.

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