DRSC/TRiP Functional Genomics Resources

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Protein Alignment: MetRS and Aimp1

Sequence 1:NP_611382.1 Gene:MetRS FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:NP_031952.2 Gene:Aimp1 MGIID:102774 Length:319 Species:Mus musculus

Alignment Length:279 Identity:60/280 (21%)
Similarity:102/280 (36%) Gaps:103/280 (37%)


  Fly   808 KYGGAQATNDAAHSQISAADLEKAVQ--AQADKVRE-LK---ASTKDKAIWQP---EVTKL---- 859
            ::.|..|||||.        |::..|  |:||::.| ||   |..|:|||.|.   |..||    
Mouse     5 RFWGKMATNDAV--------LKRLEQKGAEADQIIEYLKQQVALLKEKAILQATMREEKKLRVEN 61

  Fly   860 LDLKKQLEEAKKK-------------------------TAT-----AAAPAATPAPSNGSQSVQD 894
            ..|||::||.|::                         ||:     :.:.|.|.:|:...|....
Mouse    62 AKLKKEIEELKQELILAEIHNGVEQVRVRLSTPLQTNCTASESVVQSPSVATTASPATKEQIKAG 126

  Fly   895 LEKAIQEQGDKVRKLKGSTKDK-------TVWQP--------EVNILLDLKKQLEAVQKAAKAAP 944
            .||.::|:.:|    ||..|:|       |..:|        .:..::..||..:|.....:...
Mouse   127 EEKKVKEKTEK----KGEKKEKQQSAAASTDSKPIDASRLDLRIGCIVTAKKHPDADSLYVEEVD 187

  Fly   945 AANAAPAASPAATADAAKVKALEDKI-----------------------AQQAEKVRTL------ 980
            ...|||....:...:...::.:::::                       |...|||..|      
Mouse   188 VGEAAPRTVVSGLVNHVPLEQMQNRMVVLLCNLKPAKMRGVLSQAMVMCASSPEKVEILAPPNGS 252

  Fly   981 ----KATGDAAVWKPEVDI 995
                :.|.||...:|:.::
Mouse   253 VPGDRITFDAFPGEPDKEL 271

Known Domains:


GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GstA 1..175 CDD:223698
GST_N_family 1..65 CDD:238319
GST_C_family 63..164 CDD:295467
PRK12268 254..812 CDD:237029 1/4 (25%)
MetRS_core 255..625 CDD:173907
Anticodon_Ia_Met 634..763 CDD:153411
MetRS_RNA 828..868 CDD:238475 21/53 (40%)
MetRS_RNA 895..938 CDD:238475 13/58 (22%)
MetRS_RNA 966..1009 CDD:238475 9/64 (14%)
Aimp1NP_031952.2 NUDE_C 17..>117 CDD:282704 27/100 (27%)
tRNA_bind_EMAP-II_like 157..259 CDD:239198 11/102 (11%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_COG0143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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