DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MetRS and MetRS-m

DIOPT Version :10

Sequence 1:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:XP_312573.5 Gene:MetRS-m / 1273580 VectorBaseID:AGAMI1_002951 Length:563 Species:Anopheles gambiae


Alignment Length:641 Identity:150/641 - (23%)
Similarity:247/641 - (38%) Gaps:150/641 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   258 ITSALPYVNNVPHLGNIIGCVLSADIYARYSR----SAGYNTLLICGTDEYGTATENKALAENLT 318
            :|:.:.|||..||:|::...|: ||...|:::    :...|..|..||||:|...:..|:..:.:
Mosquito    20 VTTPIFYVNAAPHIGHLYSSVI-ADAIHRFNQITCPAESGNCFLSTGTDEHGLKIQQAAIKHSTS 83

  Fly   319 PREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVEQLLCQKCD 383
            ..:.||.....:..::..|.|.:..|.|||..:....||..::.:..:..|.:.|.....|...:
Mosquito    84 TEDYCDAISTKYRELFGRFQIDYSRFIRTTDTDHRQAVQSFWRSLAASDSIYSASYSGWYCVPDE 148

  Fly   384 RFLADRFVEGTCPHPGCGYEDARGDQCD-KCGKLVNATELIRPRCKVCNSAPVLRSSDQLFIDLP 447
            .||.|..::          |:.||::|. :.|..|..||                 .:.....|.
Mosquito   149 TFLTDSQLK----------ENERGEKCSLESGHPVEWTE-----------------EENYMFRLS 186

  Fly   448 KAEPQLKEWVDKSEGGWTHNAKV--ITRAWLKEGLKPRCITRDL---KWGIPVPHEGFEKKVFYV 507
            :.:..::.||...||......|.  |...||:|.|....|:|.:   .||:|||.:  ..:..||
Mosquito   187 RYQDDVRHWVKGLEGRRIQPDKFGRILLDWLEEPLPDISISRPMNRVSWGVPVPSD--PSQSVYV 249

  Fly   508 WFDAPFGYVSMTKRYTKE-YQQWWQPAKGTDVELFQFMAKDNVPFHSVVWPSVLLA--INKGHTL 569
            |.||...|:::. .|.|| ::..|.|.       .|.:.||.:.||.:.||:.|||  |.....|
Mosquito   250 WLDALVNYLTVA-GYPKESFRTRWPPT-------VQVLGKDILKFHGIYWPAFLLAAQIEPPRQL 306

  Fly   570 VSHIMATEYLNYEDGKFSKSRGIGVFGNDAQE----TGIPADVWRFYLASARPEGQDSSFSWNDL 630
            :.|    .:...::.|.|||:...|..|:..|    .|:     |::|........|.::|...:
Mosquito   307 LVH----SHWTVDNQKMSKSKQNVVDPNERAELYTYEGL-----RYFLLREGVAHSDGNYSDTKV 362

  Fly   631 AARNNSELLNNLGNFVNRALVFCEK--NFSSTVPGVITTQDELVLLALINRELRGYINSMEKAK- 692
            ....||||.:.|||.::|.   |.|  |..|..|.|             :||..|.:..::..| 
Mosquito   363 LRILNSELADTLGNLLSRC---CGKALNAESIFPAV-------------DREALGALKEIDATKR 411

  Fly   693 -----------------------LRDGVRHLLAISRHGNGYMQSQQPWVLLKGTDDQKTRA--ST 732
                                   :.|.:.|||   ...|.:.::..|| .||.:|:...||  :|
Mosquito   412 MLEALEEMPDKASSHYKNYNFYLVVDTIVHLL---HTANNFFETTAPW-KLKKSDNPADRAKLNT 472

  Fly   733 IIGLCVNIACLLANLLFPYMPTTARTLFGQLNAKQTPLNAEKPLVTLLLPAGHQIGKPAPLFAKL 797
            |:.:.:.:.........|.:|..::.|..:|                      ||...|..:..|
Mosquito   473 ILSVTMEVLRQAGIAAQPIVPGLSKQLLDKL----------------------QIVPTARRWNNL 515

  Fly   798 EQSFIDELKGKYGGAQATNDAAHSQ----ISAADLEKAVQAQADKVRELKASTKDK 849
            :.||            .|.||..:|    :....:..|.:...|::|..|..||.|
Mosquito   516 QVSF------------RTQDAPLAQDECILFRRIMPPAQKTDPDQIRSEKRPTKKK 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GST_N_5 1..70 CDD:436537
GST_C_family 63..164 CDD:470672
PLN02610 248..>850 CDD:215329 150/641 (23%)
MetRS_RNA 895..938 CDD:238475
MetRS_RNA 966..1009 CDD:238475
MetRS-mXP_312573.5 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.