DRSC/TRiP Functional Genomics Resources

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Protein Alignment MetRS and Yars1

DIOPT Version :10

Sequence 1:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:NP_598912.5 Gene:Yars1 / 107271 MGIID:2147627 Length:528 Species:Mus musculus


Alignment Length:353 Identity:72/353 - (20%)
Similarity:127/353 - (35%) Gaps:100/353 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   708 NGYMQSQQ-PWVLL----------------------------KGTDDQKTRASTIIGLCVNIACL 743
            :.|:.:.: ||.||                            ||||.|.::..|           
Mouse    77 HAYLDNMKAPWELLELRTSYYENVIKAMLESIGVPLEKLKFIKGTDYQLSKEYT----------- 130

  Fly   744 LANLLFPYMPTTARTLFGQLNAK----QTPLNAEKPLVTLLLPAGHQIGKPAPLFAKLEQSFIDE 804
                |..|..::..|   |.:||    :.....|.||::.||..|.|         .|::.:: :
Mouse   131 ----LDVYRLSSVVT---QHDAKKAGAEVVKQVEHPLLSGLLYPGLQ---------ALDEEYL-K 178

  Fly   805 LKGKYGGAQATN--DAAHSQISAADLEKAVQAQADKVRELKASTKDKAIWQPEVTKLLDLKKQLE 867
            :..::||.....  ..|...:.|....|.|......|..|..|....:    |....:||..:.|
Mouse   179 VDAQFGGVDQRKIFTFAEKYLPALGYSKRVHLMNPMVPGLTGSKMSSS----EEESKIDLLDRKE 239

  Fly   868 EAKKKTATAAAPAATPAPSNGSQS-VQDLEKAIQEQGDKVRKLK-GSTKDKTVW-------QPEV 923
            :.|||...|...... ..:||..| ::.:...::.:...:|..| |..|..||:       ..||
Mouse   240 DVKKKLKKAFCEPGN-VENNGVLSFIKHVLFPLKSEFVILRDEKWGGNKTYTVYLELEKDFAAEV 303

  Fly   924 NILLDLKKQLE-----------------AVQKAAKAA---PAANAAPAASPAATADAAKVKALED 968
            ....|||..:|                 |::|.|.||   |:....||..||..::..:|  :..
Mouse   304 VHPGDLKNSVEVALNKLLDPIREKFNTPALKKLASAAYPDPSKQKPPAKGPAKNSEPEEV--IPS 366

  Fly   969 KIAQQAEKVRTLKATGDA-AVWKPEVDI 995
            ::..:..|:.:::...|| :::..::|:
Mouse   367 RLDIRVGKILSVEKHPDADSLYVEKIDV 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GST_N_5 1..70 CDD:436537
GST_C_family 63..164 CDD:470672
PLN02610 248..>850 CDD:215329 34/176 (19%)
MetRS_RNA 895..938 CDD:238475 13/67 (19%)
MetRS_RNA 966..1009 CDD:238475 4/31 (13%)
Yars1NP_598912.5 nt_trans 8..328 CDD:469580 57/283 (20%)
'HIGH' region. /evidence=ECO:0000250|UniProtKB:P54577 44..52
'KMSKS' region. /evidence=ECO:0000250|UniProtKB:P54577 222..226 0/3 (0%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P54577 242..247 3/4 (75%)
PLN02610 <327..528 CDD:215329 15/70 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 339..363 7/23 (30%)
Blue background indicates that the domain is not in the aligned region.

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