DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment MetRS and mars2

DIOPT Version :10

Sequence 1:NP_611382.1 Gene:MetRS / 37177 FlyBaseID:FBgn0034401 Length:1022 Species:Drosophila melanogaster
Sequence 2:XP_002940449.2 Gene:mars2 / 100488527 XenbaseID:XB-GENE-5862162 Length:571 Species:Xenopus tropicalis


Alignment Length:591 Identity:150/591 - (25%)
Similarity:224/591 - (37%) Gaps:107/591 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   252 GERNVLITSALPYVNNVPHLGNIIGCVLSADIYARYSRSAGYNTLLICGTDEYGTATENKALAEN 316
            |.|..|.|:.:.|||..||||::...:| ||:..|||...|..:.|..||||:|...:..|.|.:
 Frog    41 GTRPHLYTTPIFYVNASPHLGHVYSALL-ADVQHRYSAMCGIESRLSTGTDEHGMKVQQAASALS 104

  Fly   317 LTPREICDKYFELHNAIYRWFGIGFDYFGRTTTQEQTDIVQEAFKDVLKAGYIITESVEQLLCQK 381
            |.|...|.........|:....|.:..|.|||.....:.|...:..:.:.|||...:.|...|..
 Frog   105 LDPHTFCSSVSLQFRNIFDDLDISYTDFVRTTEPRHKEAVSRFWMTLEERGYIYKGTYEGWYCTS 169

  Fly   382 CDRFLADRFVEGTCPHPGCGYEDARGDQCDKCGKLVNATELIRPRCKVCNSAPVLRSSDQL---- 442
            .:.||:               |....::.|..|..:..:               |.|..|:    
 Frog   170 DEAFLS---------------EGQTAERIDSEGNKIRVS---------------LESGHQVHWVS 204

  Fly   443 ----FIDLPKAEPQLKEWVDKSEGGWTHNAKV--ITRAWLKEGLKPRCITRD---LKWGIPVPHE 498
                ...|....|.|..|:....   .|.|..  :...||:|.|....::|.   |.||||||.:
 Frog   205 EENYMFRLSSLRPALLNWLQTEP---VHPAPFLRLVHHWLEEELPDLSVSRQRSRLSWGIPVPSD 266

  Fly   499 GFEKKVFYVWFDAPFGYVSMTKRYTKEYQQWWQPAKGTDVELFQFMAKDNVPFHSVVWPSVLLA- 562
              ...|.|||.||...|::.......:...|     |....|   :.||.:.||::.||:.|:| 
 Frog   267 --SSHVIYVWLDALVNYLTAAGYPNLQLAPW-----GPSTHL---LGKDILRFHAIYWPAFLIAA 321

  Fly   563 -INKGHTLVSHIMATEYLNYEDGKFSKSRGIGVFGNDAQETGIPADVWRFY---------LASAR 617
             ::..|.|:.|    .:...|..|.|||         .:....|||..|.|         |....
 Frog   322 GLSPPHKLLVH----SHWTSEGTKMSKS---------LKNVVDPADCIRRYTKDGLRYYLLRHGA 373

  Fly   618 PEGQDSSFSWNDLAARNNSELLNNLGNFVNRALV--------FCEKNFSSTVPGVITTQDELVLL 674
            || :|..|:........||||.:.||..:||...        |.:.::.| .|.....|.:.||.
 Frog   374 PE-RDCDFTHRTARTLLNSELADALGGLLNRCTAPAINPMQHFPKFHYDS-FPSAAHDQLQGVLA 436

  Fly   675 ALINRELRGYINS-MEKAKLRDGVRHLLAISRHGNGYMQSQQPWVLLKGTDDQKTRASTIIGLCV 738
            .|.|  |...::. ::|.::...:..:.|..|..|.:.|||.||.|.:|.:.:.....::|.:.:
 Frog   437 NLQN--LPAEVDQWVKKFQVHKALECIDACVRRSNAFFQSQAPWKLQRGVEKEAALRDSVIYVTL 499

  Fly   739 NIACLLANLLFPYMPTTARTLFGQLNAKQTPLNAEKPLVTLLLPA---------GHQIG-KPAPL 793
            ....|.|.||.|.:|..|.....:|.   .||..........|.|         |..:| :...|
 Frog   500 ESLRLYATLLQPAVPGLATAALERLG---VPLEMRTLKGNTFLAATRGESCYFQGQTLGPEKGLL 561

  Fly   794 FAKLEQ 799
            |.:||:
 Frog   562 FPRLER 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MetRSNP_611382.1 GST_N_5 1..70 CDD:436537
GST_C_family 63..164 CDD:470672
PLN02610 248..>850 CDD:215329 150/591 (25%)
MetRS_RNA 895..938 CDD:238475
MetRS_RNA 966..1009 CDD:238475
mars2XP_002940449.2 MetG 43..566 CDD:439913 147/586 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.