DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17821 and Elovl1

DIOPT Version :10

Sequence 1:NP_725820.2 Gene:CG17821 / 37159 FlyBaseID:FBgn0034383 Length:262 Species:Drosophila melanogaster
Sequence 2:NP_001037740.1 Gene:Elovl1 / 679532 RGDID:1587151 Length:279 Species:Rattus norvegicus


Alignment Length:266 Identity:86/266 - (32%)
Similarity:151/266 - (56%) Gaps:22/266 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LLDLFRGLP--ADP--VHLPMFGTPLPAIVIVLGYLLLIFKVGPDFMRSRKPYNMRKAMLIYNFC 65
            :::|::.|.  |||  .:.|:.|:||....|:|.|:..:..:||..|.:|||:.:|..|::|||.
  Rat     4 VVNLYQELMKCADPRIQNYPLMGSPLLITSILLTYVYFVLSLGPRIMANRKPFQLRGFMIVYNFS 68

  Fly    66 QVLMNSGI---FLMGTYYLFIKKLYDFRCMTMLSSDHPDKDVDRLLTYFYFINKVIDLIDTIFFV 127
            .|.::..|   |||..:.    ..|.:||..:..|::|:......:.:.:.::|||:|:||:.|:
  Rat    69 LVTLSLYIVYEFLMSGWL----STYTWRCDPVDFSNNPEALRMVRVAWLFMLSKVIELMDTVIFI 129

  Fly   128 LRKSNKQITVLHVYHHVFMVLGVPLTYYF---YGPGGQYNLMGYLNSFVHVVMYAYYFASAWYPN 189
            |||.:.|:|.|||:||..:    |.::::   ..|||..:....:||.||||||.||..||..|.
  Rat   130 LRKKDGQVTFLHVFHHSVL----PWSWWWGIKIAPGGMGSFHAMINSSVHVVMYLYYGLSALGPV 190

  Fly   190 VKSTFWWKEYITKLQFLQFMILFAQSVLTLWLNPGC--RFPKVLQYVQLGGSVSMMTMFGNFYYQ 252
            .:...|||:::|.:|.:|| :|.:..:...:..|.|  ::|.::..:.:.|:: ...:|.||:|.
  Rat   191 AQPYLWWKKHMTAIQLIQF-VLVSLHISQYYFMPSCNYQYPIIIHLIWMYGTI-FFILFSNFWYH 253

  Fly   253 TYVKAK 258
            :|.|.|
  Rat   254 SYTKGK 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17821NP_725820.2 ELO 20..262 CDD:460083 81/247 (33%)
Elovl1NP_001037740.1 ELO 23..262 CDD:460083 81/247 (33%)

Return to query results.
Submit another query.