DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and tnfaip2b

DIOPT Version :10

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_697839.5 Gene:tnfaip2b / 569366 ZFINID:ZDB-GENE-081107-56 Length:613 Species:Danio rerio


Alignment Length:690 Identity:131/690 - (18%)
Similarity:276/690 - (40%) Gaps:136/690 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 YDALEVVREENTK-HS-QYATAMENLK-HIFNVDASVQKTMALIEDDKLLNAHQCLADLENSRDD 156
            :..|.:.::...| || :..|..:||| |.| |||..|   .::.:|:|....|         |.
Zfish     5 HGVLNLFKKNGKKSHSPEIPTFKQNLKAHRF-VDACKQ---LILREDRLFVLKQ---------DG 56

  Fly   157 LLYELHKQPKQHASDKITLKRHFEKVDTVSQELEKKLRLILSRTLNTLRKKPTIIVTALRIIERE 221
            :..::....::..|:....|.:.:.::.|.|.||..|.|       ..:::..::..|:..:..|
Zfish    57 IGSKMRLVEEEEDSEARLAKDYEDLLECVRQTLENSLEL-------QSKEEQEMLKEAVHAVLEE 114

  Fly   222 EKND----QFALQQQKVTGFLPPGRPKAWRRMIMDVLQQSVITRIEGSKLEERADNKMWLVRDLE 282
            ||.|    .|..:|:      |..||:..:::...:|:..|..|:|.:.::...|.:..:.:.:.
Zfish   115 EKQDIRWEGFQEKQR------PSWRPRRCKQIHEALLEMLVQRRMEEAPIDLSIDVRSSMQQSII 173

  Fly   283 ILRQIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLDNIVRSGLEGNEYVSMMAWVTH 347
            ...:.:.|||..|.:....|:|...::...|...||:..::.|..:....|...:.|.::.||..
Zfish   174 CKAKRLKEDLLKVVTWVSCCYPEELNVCQFYATLYHKAFAARLREVAEFTLCDEDCVLILQWVNQ 238

  Fly   348 TYPGV----ELMSHPDLNVDVHRQIGTLLRPEHLKALEDEYLQNMQRNFQEWMTKAAETEKQEWF 408
            .||.:    |:....|     ..::..||..:.|..||.::|.|.:|...:.:....:.|:..|.
Zfish   239 DYPSILNCREIKERID-----QAKLDPLLPEDLLAPLEQQFLSNEKREVSKCLHNILDREETAWR 298

  Fly   409 TETVPDQDEEYYHTSAPVIIFQMIDQHLQVTNTIHQELTFKALVMSIQQVEIFGQTYLKNVIELK 473
            ...:|...::.|.....:.:.|...:|::.|..:..:.| ||..::.|.     ..:||   :.:
Zfish   299 DGKLPQLMDQVYCCPQAIDVIQFFHRHVEFTEQVLGDKT-KARRITCQM-----SNFLK---DYR 354

  Fly   474 EHHFRNRDQIKYFTHYIITIVNNSQQMVELAQQMKQLYWPKSRTEHYEDFERLLATFQRIRAHAA 538
            ..|.:              ::.:.|...|:...:...|..:.|                      
Zfish   355 AFHAK--------------VIKSKQPNTEVVLMVNLSYLIQCR---------------------- 383

  Fly   539 SYLLEEAFLDME------------------CHF--------NDLF----TAKWLASNIAV-DTIC 572
            .|:::.|.|..|                  |:|        .||:    :.:||.::..| :.:.
Zfish   384 DYIIKNAHLFPEDVKTDCLSLLTGMTESSHCYFTSNMHREMKDLYRKVGSNEWLKNSKGVCEKLL 448

  Fly   573 VTLDDYFQDYNHLRPNNFEMVINEAQKLLAKRYIRALLSKRLSKPRAECDAITRKIKTEAKRFKL 637
            ..||.:.|.:|:|.....:.::....|.....|||.::.:::.        ::.|.:.:.....|
Zfish   449 AKLDRHIQKFNNLDKTCCQELLGRIHKEFLAEYIRKMMKQKIK--------LSNKEQQQLAASAL 505

  Fly   638 FF--EKIAPKISLSDSPL----DLISTLSALLS-SDIELLVLDLHTLLGSYPSLNEDHLVRLFYI 695
            .|  |:|...::.:.|.:    |::..|:.||. .|.:.:.|:|..|:.:||.|:|.|:.....:
Zfish   506 CFNSERIHTFLTSAGSNMDWLKDILPKLAGLLKLQDPDSVKLELVNLMRAYPDLSERHISAWLKL 570

  Fly   696 RNDVKAAEVREKVQDAMKSKKAMVSIAKQDCI-FKEIVFS 734
            :.::..::::..::....|::.|  ...||.: |.:..||
Zfish   571 KGNLSPSDLKMILKSVACSQEEM--SGNQDLLDFSKSFFS 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:450399 109/598 (18%)
tnfaip2bXP_697839.5 Sec6 72..583 CDD:450399 105/581 (18%)

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