DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec6 and exoc3l1

DIOPT Version :10

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:NP_001092892.1 Gene:exoc3l1 / 567832 ZFINID:ZDB-GENE-061207-36 Length:780 Species:Danio rerio


Alignment Length:737 Identity:212/737 - (28%)
Similarity:374/737 - (50%) Gaps:45/737 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 DLQQLEEQARQAALKDIQNMLQRPGQLEKVEQYRHRIARKKASVEALLKTGMQGQLDGVRVGLKQ 66
            :|::.|..||.||||....:..||..|||:.||:.|.:::.||:::.||:.:|..|:||..||.|
Zfish    24 ELERAECLARGAALKWASGVFCRPEHLEKLGQYKKRESQRTASIQSRLKSVVQSYLEGVDWGLGQ 88

  Fly    67 LETCMQDVREVRRRMDEVERLLRGVPEVYDALEVVREENTKHSQYATAMENLKHIFNVDASVQKT 131
            |.....::|.|...:.:.....|...|....||.:||.:..|.|...|:.||..::.|.:.|.:|
Zfish    89 LREARAELRGVSHDLYKANLESRKNSEEVTTLETLREISVSHCQLLAAVSNLPRLYKVRSMVLET 153

  Fly   132 MALIEDDKLLNAHQCLADLENSRDDLLYELH-----KQPKQHASDKITLKRHFEKVDTVSQELEK 191
            ..|:|..:||.||..|.:||..:|::|.:|.     ...:.::.|:..::.:|..|..:...|.|
Zfish   154 ERLVESRRLLEAHARLMELERWQDEVLLQLQGPRGSSGTELNSEDEELVRNYFSGVGRLVDALAK 218

  Fly   192 KLRLILSRTLNTLRKKPTIIVTALRIIEREEKNDQFALQQQK-VTGF---LPPGRPKAWRRMIMD 252
            :|..::...|:...:.||..|:|:||:||||..|||.|:::: .:|.   :|.|||:.||.....
Zfish   219 ELWAVVGSGLSLAHQNPTPFVSAVRIVEREEALDQFFLEERRSASGHNIPMPAGRPRNWRDRFFK 283

  Fly   253 VLQQSVITRIEG-SKLEERADNKMWLVRDLEILRQIILEDLRVVKSLCVPCFPPHYDIFGEYVKF 316
            |::::|..|... |.|..|...   |...|..|:..|:.||..|:.....|.|.||.:...|:.|
Zfish   284 VMEEAVSARFRSVSYLHTRGPG---LASHLSALQHCIMGDLSTVRHCLEQCVPAHYHLTRAYLHF 345

  Fly   317 YHEGLSSYLDNIVRSGLEGNEYVSMMAWVTHTYPGVELMSHPDLNVDVH-RQIGTLLRPEHLKAL 380
            .|:.|.::|..:....|||.|..:::.||.|.|...|:|..|.|..::. ..:|.|:..|.|:.|
Zfish   346 CHQFLQTHLGLVSGWELEGGEIFAVLNWVLHIYNSSEMMGEPALLAELEIENLGPLISQEGLEQL 410

  Fly   381 EDEYLQNMQRNFQEWMTKAAETEKQEWFTETVPDQDEE-YYHTSAPVIIFQMIDQHLQVTNTIHQ 444
            :::|:|.::::..|||.||.|.|..:|..:..||.|.| |||||.|.||.||::::.:|...|.:
Zfish   411 QNKYVQKVRKSVSEWMQKALEVELTDWQRDQEPDIDHEGYYHTSLPTIITQMLEENARVALMISE 475

  Fly   445 ELTFKALVMSIQQVEIFGQTYLKNVIELKEHHFRNRDQIKYFTHYIITIVNNSQQMVELAQQMKQ 509
            .|..:.:.|.:.::|.....:...|||..:.|.::....|::.||::..:||...:         
Zfish   476 ALRDQTIQMGLYEMEKLLSRFRDAVIEFGKEHRKDPTVNKFYLHYLLACINNCIIL--------- 531

  Fly   510 LYWPKSRTEHYED---------FERL----LATFQRIRAHAASYLLEEAFLDMECHFNDLFTAKW 561
                |:.||..:.         :.|:    ||...|....|...:::....:::.|..:|.::.|
Zfish   532 ----KTSTESLQQQICSFVSNRYSRIPLGPLAALDRAVRKACRLVMDHLLFELQPHLQELLSSTW 592

  Fly   562 LASNIAVDTICVTLDDYFQDYNHLRPNNFEMVINEAQKLLAKRYIRALLSKRL-SKPRAECDAIT 625
            |........:|..|:.:.:.||.:|....:.:..|.|.|....|:||::.||| .:...|...:.
Zfish   593 LDQGDVTLNMCGVLERHCELYNRVRQPCRQRLKEECQWLTVVEYVRAVMQKRLVCRSSDEQKQLA 657

  Fly   626 RKIKTEAKRFKLFFEKIAPKISLSD-SPLDLISTLSALLS-SDIELLVLDLHTLLGSYPSLNEDH 688
            :::..:|::.:...:.:....::.: :|..||:.|:.::: :|..:|:|::..||..||.::|:|
Zfish   658 QRMTQDAQQLRDHLQSMEIDGTIGEVNPTALIAALADIINLNDPGMLLLEISGLLSKYPDISEEH 722

  Fly   689 LVRLFYIRNDVKAAEVREKVQD 710
            :..|..||.|| ..|||:.|.|
Zfish   723 VSVLLDIRGDV-PKEVRKSVLD 743

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:450399 155/555 (28%)
exoc3l1NP_001092892.1 Sec6 206..763 CDD:428738 155/555 (28%)

Return to query results.
Submit another query.