DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and exoc3l4

DIOPT Version :10

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_073775775.1 Gene:exoc3l4 / 563246 ZFINID:ZDB-GENE-081028-71 Length:817 Species:Danio rerio


Alignment Length:650 Identity:141/650 - (21%)
Similarity:265/650 - (40%) Gaps:55/650 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 PEVYDALE---VVREENTKHSQYATAMENLKHIFNVDASVQKTMALIEDDKLLNAHQCLADLENS 153
            |||.|..|   |:...:|    |.     |..|..:..||.:...|||.:.|..|:..|..|.  
Zfish   189 PEVADECEGQMVLELRDT----YV-----LPEIPAMPLSVMEINKLIEMEVLEEAYVNLLSLR-- 242

  Fly   154 RDDLLYELHKQPKQHASDKITLKR-HFEK-VDTVSQELEKKLRLILSRTLNTL--RKKPTIIVTA 214
                 .||.:|.|....:...::. |.|| :..:...|..|:..|: |..:||  |.|..::..|
Zfish   243 -----LELQQQRKSQNQEDCPIELVHKEKDLSLLYGTLRNKMSDIV-RNSSTLPSRNKELLVYVA 301

  Fly   215 LRIIEREEKNDQFALQQQKVTGFLPPGRPKAWRRMIMDVLQQSVITRIEGSKLEERADNKMWLVR 279
            ..|:|.|::.|:             ||..:.||......::..|...::...|:.|..|..||..
Zfish   302 YIILEEEKRQDE-------------PGAMQGWRESWRVAVRDGVRDTLKRVHLDTREQNISWLAV 353

  Fly   280 DLEILRQIILEDLRVVKSLCVPCFPPHYDIFGEYVKFYHEGLSSYLDNIVRSGLEGNEYVSMMAW 344
            .|.:|.:.|||||..||:..|..:||.:::|..||..:||.:..:|..::....|..:|.:::.:
Zfish   354 HLGLLGKAILEDLERVKTELVSSYPPEFNVFETYVSCHHEAVGEHLKTLLEKVTELKDYYALLDF 418

  Fly   345 VTHTYPGVELMSHPDLNVDVHRQIGTL-LRPEHLKALEDEYLQNMQRNFQEWMTKAAETEKQE-W 407
            :.|.||..::|....|..:|......| |..:.|..::.:|...:|.:.:..:.:..|.|.:| |
Zfish   419 IIHRYPSEKIMGSTSLQPEVKEDNRALPLDNDFLNQIKMKYCSRLQVDMRTSLDRVIELENEEIW 483

  Fly   408 FTETVPDQDEEYYHTSAPVIIFQMIDQHLQVTNTIHQELTFKALVMSIQQVEIFGQTYLKNVIEL 472
            .....|:.||..|.:...:.|:..|..|:|.:..|...|..:.:...:.:::.|.:.:....:| 
Zfish   484 KERRKPEIDEGIYSSHIDMDIWTNIKGHVQGSRRIDVTLEKEVVRSCLDELKSFPKRFESAFVE- 547

  Fly   473 KEHHFRNRDQIKYFTHYIITIVNNSQQMVELAQQMKQLYWPKSRTEHYEDFERLLATFQRIRAHA 537
               ..|.......:..|.|:.:|:...:.|..:..||        ......|::......:....
Zfish   548 ---SCRVFSNSSLWAEYHISYINSFSDLKEHMEGYKQ--------SCQIQLEQVRKEIDGLTTRL 601

  Fly   538 ASYLLEEAFLDMECHFNDLFTAKWLASNIAVDTICVTLDDYFQDYNHLRPNNFEMVINEAQKLLA 602
            ...|:|:...|::.......|.||.:.:.....:...:....:...::.|...:..:||....:.
Zfish   602 RQTLMEQFKTDVKPFLRRQMTGKWFSFDEDFSQLATRIKSLSEQSKYMSPKYRQAFVNEVHFFVV 666

  Fly   603 KRYIRALLSKRLSKPRAECDAITRKIKTEAKRFKLFFEKIAPKISLSDSPLDLISTLSALLSSDI 667
            |.|:..|:....|....:.:....||..:.:..|..|:.:...:....|..:.:|.:.....||:
Zfish   667 KEYVSQLMKNNYSCKNRKNETAAAKITKQWEELKEIFQDMHSTLDWLHSVGNHLSQIIGCKKSDV 731

  Fly   668 ELLVLDLHTLLGSYPSLNEDHLVRLFYIRNDVKAAEVREKVQDAMKSKKAMVSIA-KQDCIFKEI 731
            :   .:|..|:.:||.:...||..:.|.|..::..|....:|...:.|:::.|.. |:..:|.||
Zfish   732 K---HNLKPLVENYPDIRRSHLSAVLYFRGIIRGREKHVILQRLAELKQSLGSSGNKEQALFSEI 793

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:450399 115/557 (21%)
exoc3l4XP_073775775.1 None

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