DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec6 and exoc3l1

DIOPT Version :10

Sequence 1:NP_611351.1 Gene:Sec6 / 37142 FlyBaseID:FBgn0266671 Length:738 Species:Drosophila melanogaster
Sequence 2:XP_002931727.3 Gene:exoc3l1 / 100496045 XenbaseID:XB-GENE-6258780 Length:806 Species:Xenopus tropicalis


Alignment Length:735 Identity:193/735 - (26%)
Similarity:369/735 - (50%) Gaps:32/735 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LQQLEEQARQAALKDIQNMLQRPGQLEKVEQYRHRIARKKASVEALLKTGMQGQLDGVRVGLKQL 67
            |::.|..||.||||....:..||.||.::..||.|..::..|::..||:.:|..|:||..|:|||
 Frog    50 LEKAESLARGAALKWASGIFSRPDQLTRLGHYRRRETQRNNSIQTRLKSAVQSYLEGVEQGIKQL 114

  Fly    68 ETCMQDVREVRRRMDEVERLLRGVPEVYDALEVVREENTKHSQYATAMENLKHIFNVDASVQKTM 132
            .:.:.:|:.|:|.:.|.:.:.|........|:.:|....:|.|.:..:::|..|:.|...:..|.
 Frog   115 HSALTEVQNVQRELSEAQGIWRKTNGQLSRLQPIRNLVAEHVQLSVVIQSLPFIYTVPELISHTK 179

  Fly   133 ALIEDDKLLNAHQCLADLENSRDDLLYELHK------------QPKQHASDKITL-KRHFEKVDT 184
            .|||...||.||:.|.:||:.||.:||.|.:            :..||..|...| ::.|..|:.
 Frog   180 NLIETQNLLEAHRNLRELESFRDIVLYRLQRVRPLEDPSCCTGEDVQHGEDPAELVQQFFAGVNN 244

  Fly   185 VSQELEKKLRLILSRTLNTLRKKPTIIVTALRIIEREEKNDQFALQQQKVTGFLPPGRPKAWRRM 249
            :|::|.:.|..:...:::..|..|:::|:|:|||||||..|:...:......:.||||||.||..
 Frog   245 LSEDLGRVLFSLAQSSVSLARSNPSLLVSAVRIIEREEYLDEEDTKGSPQQLWRPPGRPKHWRDS 309

  Fly   250 IMDVLQQSVITRIEGSKLEERADNKMWLVRDLEILRQIILEDLRVVKSLCVPCFPPHYDIFGEYV 314
            ....|::.|..|:.||.|:|.......|....:.|:..:|::|:.|.|:..||.||.|::.....
 Frog   310 FFQALERGVCNRLIGSGLQEEDITPTGLATHFKDLQSKVLDELQAVCSVLAPCVPPQYEVCRAVA 374

  Fly   315 KFYHEGLSSYLDNIVRSGLEGNEYVSMMAWVTHTYPGVELMSHPDLNVDVH-RQIGTLLRPEHLK 378
            ...|..:|.::.:|:...|.......::.|....||..:::.|.||:.::. .::|.||.||.|:
 Frog   375 LMCHHAISRHVRDILSHDLAHPALYRVLHWSVIVYPSEDMIGHQDLSPEIDATELGALLSPEFLE 439

  Fly   379 ALEDEYLQNMQRNFQEWMTKAAETEKQEWFTETVPDQDEE-YYHTSAPVIIFQMIDQHLQVTNTI 442
            ..::.|.::::....:|:.||.|.|..|||.|..||:|:: .|.:|...:|.||:.:::|:.:.:
 Frog   440 EQQNRYTRSVKVCLAQWIQKALEVEYSEWFREQEPDKDQDGLYLSSLQQLIMQMLAENMQLASVL 504

  Fly   443 HQELTFK---ALVMSIQQVEIF-GQTYLKNVIELKEHHFRNRDQIKYFTHYIITIVNNSQQMVEL 503
            ...|..:   |.|:.:....:: .:..:|..||    |.::|....|:..|::.|:|.   ...|
 Frog   505 GDSLESRMRNAAVLEMDNCLVWLREALVKYGIE----HMKDRTNPTYYIPYLVAIING---CTAL 562

  Fly   504 AQQMKQLYWPKSRTEHY-EDFERLLATFQRIRAHAASYLLEEAFLDMECHFNDLFTAKWLASNIA 567
            :..:..|...:|..... ::...|..:..:.:..|...||:|...:::..|..:.:..||:.:..
 Frog   563 SSSISYLQPGESANPVIRKNAPCLQNSLDKTQKKACHLLLDELQTELQPLFLQIPSRTWLSGSDI 627

  Fly   568 VDTICVTLDDYFQDYNHLRPNNFEMVINEAQKLLAKRYIRALL-SKRLSKPRAECDAITRKIKTE 631
            :...|..::.:.|..:..|....:.::.:.:::|...|::|.: ||.:.|...|...:..::.::
 Frog   628 MRITCEKVELFNQHLSMARAPVCQFLLAQTERMLVIEYVKAFMHSKMVCKSSLERQQMAERMSSD 692

  Fly   632 AKRFKLFFEKIAPKISLSDSPLDL-ISTLSALLSSDIELLVLDLHTLLGSYPSLNEDHLVRLFYI 695
            |:..:....::..:.|....||.| |..:.||  .|..||.|::..|:.|:|.:::||::.|..:
 Frog   693 AEELRAALSRMGLEESTLCVPLILSIQEIFAL--KDPSLLSLEVSGLMTSFPDISDDHVLALMEL 755

  Fly   696 RNDVKAAEVREKVQDAMKSK 715
            |.|| :.::|..|.:.|:.:
 Frog   756 RGDV-SRDLRHTVLNMMQQQ 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec6NP_611351.1 Sec6 179..731 CDD:450399 135/546 (25%)
exoc3l1XP_002931727.3 Sec6 239..786 CDD:450399 135/546 (25%)

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