DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment adp and Atg16

DIOPT Version :10

Sequence 1:NP_611296.2 Gene:adp / 37073 FlyBaseID:FBgn0000057 Length:628 Species:Drosophila melanogaster
Sequence 2:NP_001138124.2 Gene:Atg16 / 326115 FlyBaseID:FBgn0039705 Length:612 Species:Drosophila melanogaster


Alignment Length:276 Identity:60/276 - (21%)
Similarity:109/276 - (39%) Gaps:73/276 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 EQEAVLVGHEGCVNCLEWTTDGMWLASGSDDYRVMIWDPFRKKLVHVIRTKHLGNVFSVKFLPKT 122
            |..|||.|....:|.:::.:.|.::...|:||...:|.....:|.|.: |.|.|.|.:.|::.:.
  Fly   361 EPRAVLSGSSAGINSVDFDSTGAYILGTSNDYGARVWTVMDNRLRHTL-TGHSGKVMAAKYVQEP 424

  Fly   123 NNSIVATCAADKFIYVYDI---------------ND--PNETLFSCIC--HFSRAKR---LATAQ 165
            ..  |.|.:.|:.:.::|:               ||  ..::|.|.|.  |:.:..|   :.|.:
  Fly   425 IK--VVTGSHDRTLKIWDLRSIACIETKFAGSSCNDLVTTDSLGSTIISGHYDKKIRFWDIRTEK 487

  Fly   166 DSPHVFWSAGEDGCILQLDIREPHR---CRPEEGIGVRLLNLHDQLENTEAKCLAINPRRTEYLA 227
            .:..|...|.    |..||:.:...   |...:.. ::||:|                |:.:.::
  Fly   488 QADDVLMPAK----ITSLDLSKDCNYLICSVRDDT-IKLLDL----------------RKNQVIS 531

  Fly   228 VGTNDPFARVYDRRKLPSTNGNGLS-ACVAYYAPGQI-VKNISRNIVHEPRGITYLTFNGNGT-- 288
            ..||:.|....|..: .|.|.:||. ||.:  |.|.| :.|::        |....|..|:.|  
  Fly   532 TFTNEHFKISCDFAR-ASFNSSGLKIACGS--ADGAIYIWNVN--------GFLEATLKGHSTAV 585

  Fly   289 ---------ELLVNIG 295
                     .:|.::|
  Fly   586 NAVSWSPNNNMLASVG 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
adpNP_611296.2 WD40 54..>242 CDD:475233 44/208 (21%)
WD40 repeat 72..108 CDD:293791 7/35 (20%)
WD40 repeat 114..154 CDD:293791 10/58 (17%)
WD40 repeat 158..203 CDD:293791 9/50 (18%)
WD40 repeat 214..268 CDD:293791 15/55 (27%)
Spy 338..>461 CDD:443119
TPR repeat 342..370 CDD:276809
TPR repeat 375..408 CDD:276809
TPR repeat 413..441 CDD:276809
WD40 repeat 513..553 CDD:293791
WD40 <526..584 CDD:475233
Atg16NP_001138124.2 ATG16 27..197 CDD:462536
WD40 <310..605 CDD:441893 60/276 (22%)
WD40 repeat 331..368 CDD:293791 4/6 (67%)
WD40 repeat 374..410 CDD:293791 8/36 (22%)
WD40 repeat 415..453 CDD:293791 6/39 (15%)
WD40 repeat 461..491 CDD:293791 6/29 (21%)
WD40 repeat 498..536 CDD:293791 9/54 (17%)
WD40 repeat 544..579 CDD:293791 12/45 (27%)
WD40 repeat 585..609 CDD:293791 2/17 (12%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.