DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pcl and PHF1

DIOPT Version :10

Sequence 1:NP_476672.1 Gene:Pcl / 37069 FlyBaseID:FBgn0003044 Length:1043 Species:Drosophila melanogaster
Sequence 2:XP_011512964.2 Gene:PHF1 / 5252 HGNCID:8919 Length:633 Species:Homo sapiens


Alignment Length:797 Identity:186/797 - (23%)
Similarity:275/797 - (34%) Gaps:249/797 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   286 EAMSSPGKSSPSPPLLATQSLLKGVNSMKPSFKTVEAAPPTPP-----------TPPSPPPPPPA 339
            |.:.||..|..|.|.....||..|  :::..::..:.|...||           .|.||      
Human    31 EGIPSPTGSDSSLPKPRRASLFFG--ALQACWRPPQDAMAQPPRLSRSGASSLWDPASP------ 87

  Fly   340 PPVAAPSPAVTYALQEDVFIKCNDGRFYLGTI--IDQTSDQYLIRFDDQSE---QWCEPDKLRKL 399
            .|.:.|.|.:...  :||..:..||..|||||  :|...:..|::|:|.|:   .|         
Human    88 APTSGPRPRLWEG--QDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDDSQFLVLW--------- 141

  Fly   400 GGGSSITAGGGGASTTESTNTSPSG-P----MCVACKRSDIEDVVE-----ICERCGRGYHRGCT 454
                              .:.||:. |    :|..|:.   |.||.     .||:|...||:.|.
Human   142 ------------------KDISPAALPGEELLCCVCRS---ETVVPGNRLVSCEKCRHAYHQDCH 185

  Fly   455 VEIVTGSG-----IWSCKRCAKPMKMQQ-------PVSHKITKPAGICRQLPYHADKLSWDEKHR 507
            |......|     .|.|::|...:..::       |.:..:   .|:...|||....|.||..|.
Human   186 VPRAPAPGEGEGTSWVCRQCVFAIATKRGGALKKGPYARAM---LGMKLSLPYGLKGLDWDAGHL 247

  Fly   508 VNEEQIYCYCGKPGKFDHNMLQCCKCRNWFHTQCMQNFKKKLLRGDMFFVFCCTVCNNGIEFVRR 572
            .|.:|.|||||.||:::..||||..|..|||..|.|...|.||.||.|:.|.|.||..|.|.|||
Human   248 SNRQQSYCYCGGPGEWNLKMLQCRSCLQWFHEACTQCLSKPLLYGDRFYEFECCVCRGGPEKVRR 312

  Fly   573 MQIEWVDVLHIALYNLRKHQHQKYHHLLNDIWPFILEQRHQLPICEKWRTLPETALMERLKQTLK 637
            :|:.||||.|:.||:|.....:||.....:|.||..|....|.:.|...| |:.....||...|.
Human   313 LQLRWVDVAHLVLYHLSVCCKKKYFDFDREILPFTSENWDSLLLGELSDT-PKGERSSRLLSALN 376

  Fly   638 DYSDRFVCGREFKRAPAFYALRHSGPPHIPKVFLEPHEELSDELLEKRFKLMLMPEEPDEGANEL 702
            .:.|||:.|||.|:....:.|....||                           |.||..|...|
Human   377 SHKDRFISGREIKKRKCLFGLHARMPP---------------------------PVEPPTGDGAL 414

  Fly   703 PK---------RVPKDVYEFNTDEDDPVETSE----DEIPIKQIIEKAKKQAAQKADKHDELPLK 754
            ..         .|.:.:.:....|.:|:...:    :|:.....:....:...|:...|.:..|:
Human   415 TSFPSGQGPGGGVSRPLGKRRRPEPEPLRRRQKGKVEELGPPSAVRNQPEPQEQRERAHLQRALQ 479

  Fly   755 PDLADDNANDGDPGKLPAPIPPLLDANSSRKRKAFRLSKRYDNSRNHCDLSSDENSSSSRGTSSL 819
            ..::.           |:|.|                                  :.|.:|:|. 
Human   480 ASVSP-----------PSPSP----------------------------------NQSYQGSSG- 498

  Fly   820 DLIIPPPVNFLGRNNPFLMATPKKASQGRSISVGTGVGVNGIINSIFKLKGTSKEQPRMVRTIKR 884
                   .||...:...|.::|.:.......|..|.              |||.:.....|    
Human   499 -------YNFRPTDARCLPSSPIRMFASFHPSASTA--------------GTSGDSGPPDR---- 538

  Fly   885 RLSAKDITIGPNQEVRRRRTRRLTTAIEVISTTTINPIPSHYLPIYAKDLQPPAPPMGKPTHGRL 949
              |..::.||...::.:.....:|.:...:|:      ||..||                     
Human   539 --SPLELHIGFPTDIPKSAPHSMTASSSSVSS------PSPGLP--------------------- 574

  Fly   950 LRQRPQKQSPSQSRRNSTSSTATSSSSNGIGAPGHSMLDLKQSVNKYFGGAMNRIDAGEPFAIRA 1014
                         ||::..|....|.|.|.|..              ..|.:..:..|:|..:.|
Human   575 -------------RRSAPPSPLCRSLSPGTGGG--------------VRGGVGYLSRGDPVRVLA 612

  Fly  1015 KRRMGNGQVQYLVEWGG 1031
            :|...:|.|||||||||
Human   613 RRVRPDGSVQYLVEWGG 629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PclNP_476672.1 PRK12323 <13..107 CDD:481241
Tudor_dPCL-like 350..401 CDD:410523 15/55 (27%)
PHD_SF 426..469 CDD:473978 15/52 (29%)
PHD2_MTF2_PHF19_like 514..565 CDD:276978 27/50 (54%)
Mtf2_C 985..1033 CDD:464077 15/47 (32%)
PHF1XP_011512964.2 Tudor_PHF1 96..148 CDD:410520 17/80 (21%)
PHD1_PHF1 155..205 CDD:276975 15/52 (29%)
PHD2_PHF1 254..305 CDD:277057 27/50 (54%)
Mtf2_C <602..631 CDD:464077 14/28 (50%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.