DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment: CG5098 and G2e3

Sequence 1:NP_001261066.1 Gene:CG5098 FlyBaseID:FBgn0034300 Length:1339 Species:Drosophila melanogaster
Sequence 2:NP_001100196.1 Gene:G2e3 RGDID:1310263 Length:717 Species:Rattus norvegicus

Alignment Length:167 Identity:43/168 (26%)
Similarity:62/168 (37%) Gaps:46/168 (27%)


  Fly  1166 PNESRSQ----CSSVDLLDCSTESKFVETFRGMGKTSENGFEVW---LHEDCAVWSNDIHLIGAH 1223
            |..|:|.    |...|  ||  .:|:     |..||.|.    |   :|..|.:.|:.|...|..
  Rat     6 PGNSQSLACVFCRKND--DC--PNKY-----GEKKTCEK----WNFSVHYYCLLMSSGIWQRGKE 57

  Fly  1224 VNG--------LDAAVWDSTRYQCVLCQQTGASICCFQRCCKAAAHVPCGRSANWSLSEEDR-KV 1279
            ..|        :...|..:::.:|.:|::.||||.|....||.:.|:|||..........|. ..
  Rat    58 EEGVYGFLIEDIRKEVNRASKLKCTVCKKNGASIGCVVPQCKRSYHLPCGLQKECIFQFTDNFAS 122

  Fly  1280 YCHLHRHEPGV-----------------VEPIKTESI 1299
            :|..||....:                 ||||.|.:|
  Rat   123 FCWKHRPVQAITSNKYRDSLPCTICLEFVEPIPTYNI 159

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG5098NP_001261066.1 PHD_SF 1068..1284 CDD:304600 35/134 (26%)
G2e3NP_001100196.1 ePHD_PHF7_G2E3_like 14..127 CDD:277139 32/126 (25%)
PHD_PHF7_G2E3_like 232..285 CDD:276971
HECTc 365..688 CDD:294058
HECTc 388..689 CDD:214523
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E2759_KOG1084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.