DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5098 and Phf6

DIOPT Version :10

Sequence 1:NP_001261066.1 Gene:CG5098 / 37063 FlyBaseID:FBgn0034300 Length:1339 Species:Drosophila melanogaster
Sequence 2:NP_001389157.1 Gene:Phf6 / 100359714 RGDID:2323526 Length:364 Species:Rattus norvegicus


Alignment Length:273 Identity:53/273 - (19%)
Similarity:78/273 - (28%) Gaps:99/273 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1021 NTHSAEDVNEKQTKVKKAPHERK-NLRGMHSSTLSNRYDADTTDSTWICVFCKRGPHKLGLGDLF 1084
            |.|..|..:.|..|..:....|| ||:|:...|.|.  .:..||.|....:..|.||:....|  
  Rat   147 NEHELEPSSPKTKKKSRKGRPRKTNLKGLAEDTRST--SSHGTDETESSSYRDRSPHRSSPND-- 207

  Fly  1085 GPYLVTSDCDEYRAAVQTPGAQDIDGMFVNKRRREDMVKGQERNLPAVPATLANIMQAPKISMHK 1149
                ....|.                 |.:....|:..:|                   |:.:..
  Rat   208 ----TRPKCG-----------------FCHVGEEENEARG-------------------KLHIFN 232

  Fly  1150 RKRKQTHDSSISYSDD----PNESRSQCSSVDLLDCSTESKFVETFRGMGKTSENGFEVWLHEDC 1210
            .|:...|...:.:|..    ...||::....|:.....|.|     ||                 
  Rat   233 AKKAAAHYKCMLFSSGTVQLTTTSRAEFGDFDIKTVLQEIK-----RG----------------- 275

  Fly  1211 AVWSNDIHLIGAHVNGLDAAVWDSTRYQCVLCQQTGASICCFQRCCKAAAHVPCG--RSANW--S 1271
                                    .|.:|.||.|.||:|.|..:.|....|..||  ..|.:  :
  Rat   276 ------------------------KRMKCTLCSQPGATIGCEIKACVKTYHYHCGVQDKAKYIEN 316

  Fly  1272 LSEEDRKVYCHLH 1284
            :|....|:||..|
  Rat   317 MSRGIYKLYCKNH 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5098NP_001261066.1 PHD_SF 1068..1284 CDD:473978 37/223 (17%)
Phf6NP_001389157.1 ePHD1_PHF6 17..131 CDD:277180
ePHD2_PHF6 212..329 CDD:277181 33/198 (17%)
Blue background indicates that the domain is not in the aligned region.

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