DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PIG-A and piga-1

DIOPT Version :9

Sequence 1:NP_001286547.1 Gene:PIG-A / 37020 FlyBaseID:FBgn0034270 Length:479 Species:Drosophila melanogaster
Sequence 2:NP_495840.1 Gene:piga-1 / 174386 WormBaseID:WBGene00008431 Length:444 Species:Caenorhabditis elegans


Alignment Length:473 Identity:214/473 - (45%)
Similarity:283/473 - (59%) Gaps:62/473 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ICMVSDFFYPSIGGVEEHVYNLSQMLLSLGHKIVVLTHAYGDCSGIRYVTGYLKVYYLPIKVCYN 67
            |.:|||||.|:.||||.|:|.|:|.|:.|||::||:||.||:..||||::..|||||||..|.||
 Worm    10 IALVSDFFCPNAGGVETHIYFLAQCLIELGHRVVVITHGYGNRKGIRYLSNGLKVYYLPFIVAYN 74

  Fly    68 QCILPTAVCNVPMLRAVLLRERVEVVHGHSAFSALAHEALMVGSLLGLKTVFTDHSLFGFADLSA 132
            ...|.:.|.::|.||.|||||.|:::||||.||:||||.||:|.|:||:|||||||||||||.||
 Worm    75 GATLGSIVGSMPWLRKVLLRENVQIIHGHSTFSSLAHETLMIGGLMGLRTVFTDHSLFGFADASA 139

  Fly   133 ALTNNL-LEVNLGMVNHAICVSHIGKENTVLRARVAKHRVSVIPNAVDTALFTPDPQQRPSNDII 196
            .|||.| |:.:|..|:..||||:..|||||||.::..::||.||||::|:|||||..|. .|:..
 Worm   140 ILTNKLVLQYSLINVDQTICVSYTSKENTVLRGKLDPNKVSTIPNAIETSLFTPDRNQF-FNNPT 203

  Fly   197 NIVVASRLVYRKGIDLLAGIIPRF-KNTPNINFIIVGDGPKRDLLEEIREKTNMQERVQMVGAVE 260
            .||...|||||||.|||..|:|:. ....::.|||.||||||..|||:.|:..:.|||.::|.:.
 Worm   204 TIVFLGRLVYRKGADLLCEIVPKVCARHKSVRFIIGGDGPKRIELEEMLERFKLHERVVILGMLP 268

  Fly   261 HNRVRDFLVRGHIFLNTSLTEAYCMAIVEAASCGLQVVSTSVGGIPEVLP-KSLILLAEPEIDAI 324
            ||:|:..|.:|.||:|||||||:||:|||||||||.||||.|||:||||| ...|.|.||..|.:
 Worm   269 HNQVKRVLNQGQIFINTSLTEAFCMSIVEAASCGLHVVSTRVGGVPEVLPIGEFISLEEPVPDDL 333

  Fly   325 YAAILIAIDRHRKSSFKVSPSVGNGHLASDANGKVKRRRRRKVDTPISPTQLPAVSAPPADQNSS 389
            ..|:|.|:||..|..                                                  
 Worm   334 VDALLKAVDRREKGL-------------------------------------------------- 348

  Fly   390 TEPVMCPYRCNELVETLYNWEDVALRTVKVYDRVLNERSFTTSELVFAVWQHGSWFLVFFVVAH- 453
               :|.|...:|.|..:|||.|||.||..:|.:.:..........:...:..|..|.:.::|.. 
 Worm   349 ---LMDPTEKHEAVSKMYNWPDVAARTQVIYQKAVESEPTGRLGRLKGYYDQGIGFGIMYIVVSC 410

  Fly   454 ---FLMRLLELW-RPRKH 467
               |.:.:|:|: .|||:
 Worm   411 IIIFWLTVLDLFDSPRKN 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PIG-ANP_001286547.1 RfaB 1..309 CDD:223515 178/307 (58%)
GT1_PIG-A_like 2..451 CDD:99970 207/450 (46%)
piga-1NP_495840.1 GT4_PIG-A-like 9..408 CDD:340827 207/451 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166952
Domainoid 1 1.000 134 1.000 Domainoid score I3117
eggNOG 1 0.900 - - E1_COG0438
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1982
Inparanoid 1 1.050 367 1.000 Inparanoid score I1249
Isobase 1 0.950 - 0 Normalized mean entropy S691
OMA 1 1.010 - - QHG53778
OrthoDB 1 1.010 - - D305260at33208
OrthoFinder 1 1.000 - - FOG0002788
OrthoInspector 1 1.000 - - oto18806
orthoMCL 1 0.900 - - OOG6_100580
Panther 1 1.100 - - LDO PTHR45871
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R517
SonicParanoid 1 1.000 - - X3161
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

Return to query results.
Submit another query.