DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oxp and Cbx6

DIOPT Version :10

Sequence 1:NP_611240.1 Gene:Oxp / 37002 FlyBaseID:FBgn0034255 Length:84 Species:Drosophila melanogaster
Sequence 2:NP_001387975.1 Gene:Cbx6 / 315136 RGDID:1307314 Length:414 Species:Rattus norvegicus


Alignment Length:60 Identity:23/60 - (38%)
Similarity:36/60 - (60%) Gaps:5/60 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 YIVEKFLGKRYLRGRPQYLTKWEGYPIEQCTWEPLENLGKCMTLIADYEAELFQQSREKK 81
            :..|..:.:|..:||.:||.||:|:.|:..||||.||: ....|||.:|    |:.||::
  Rat    11 FAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENI-LDSRLIAAFE----QKERERE 65

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OxpNP_611240.1 CD_Rhino 21..71 CDD:349280 19/48 (40%)
Cbx6NP_001387975.1 CD_Cbx6 8..65 CDD:349295 23/58 (40%)
CBX7_C 359..390 CDD:465385
Blue background indicates that the domain is not in the aligned region.

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