DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment POSH and Nost

DIOPT Version :10

Sequence 1:NP_523776.1 Gene:POSH / 36990 FlyBaseID:FBgn0040294 Length:838 Species:Drosophila melanogaster
Sequence 2:NP_001285029.1 Gene:Nost / 8673992 FlyBaseID:FBgn0259734 Length:1330 Species:Drosophila melanogaster


Alignment Length:1038 Identity:209/1038 - (20%)
Similarity:334/1038 - (32%) Gaps:338/1038 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 VASQHKLRCPECRILVSCKIDELPPNVLLMRILEGMKQ-NAAAGKGEEKGEETETQPERA----- 99
            ||....:..| .::.:...:.|||.       |.|..: :.||...:|.....:...||:     
  Fly   390 VALDMNVTAP-AKLGLDLNLPELPE-------LYGASELSLAASDNKENLPAVKPSAERSPIPNG 446

  Fly   100 ---KPQPPAESVAPPDNQLLQLQSHQQSHQPARHKQRRFL-LPHAYALFDFASGEATDLKFKKGD 160
               ..||..:|:   |:..|..:||  |:|.::...|:.| ...:...:||             |
  Fly   447 GFMAQQPHFKSL---DSFHLNTRSH--SNQSSQQSSRQSLACSSSNGEYDF-------------D 493

  Fly   161 LILIKHRIDN--NWFVGQANGQEGTFPINYVK-VSVPLPMPQCIAMYDFKMGPNDEE-GCLEFKK 221
            |..:.::..|  |.||.....||.|..||..: ....:.:..| |..| ::.|::.. ..|:.|.
  Fly   494 LKSVSYQSLNAQNLFVSIDELQELTRQINETEDFGKEIDLEYC-AHRD-QLRPSERRITLLKNKN 556

  Fly   222 STVI------QVMRRVDH---NWAEGRIGQTIGIFPIAFVELNAAAKKLLDSGLHTHPFCHPPKQ 277
            .|:|      :.:|:..|   :|. |..|..|.    ..|......|:|..|..:.:.......:
  Fly   557 QTLINFNHNKEKLRKGWHGMKHWL-GEEGSKIK----EAVRQQTPLKRLAQSRSNLNQSTADASR 616

  Fly   278 QGQRALPPVPVIDPTVVTESSSGSSNSTPGSSNSSSTSSSNNCSPNHQISLPNTPQHVVASGSAS 342
            |...     |......||||....:..|...|:.|..:|..:.||:                  :
  Fly   617 QSMS-----PERTQRDVTESCEDVTERTEMESSMSHRNSEEDLSPH------------------A 658

  Fly   343 VRFRDKGA---KEKRHSLNALLGG--GAPLSLLQTNRHSAEIL------SLPHELSRL--EVSSS 394
            .||:|:|.   :|.|..:..  ||  ...|..:...|..:|::      .|.::|::.  |:..|
  Fly   659 KRFKDEGQNGFEELRRYVKQ--GGDFSKELIFVLQERADSELIYSKSLSKLANKLNKAGREIPGS 721

  Fly   395 TA----------------------------LKP----------------TSAPQTSRVL------ 409
            .|                            :||                ::..:.:|||      
  Fly   722 VADAWRGVATEMESRSDIHRQLAASLTDELVKPLKIVVEGHHKARKAVESNVDKAARVLGEWRAS 786

  Fly   410 ---------------------KTTVQQQMQPNLPWGYLALFPYKP-RQTDELELK---KGCVYIV 449
                                 ...|:.|..|:     :||....| :|..|.|||   |.||.:.
  Fly   787 EAKAKKASHTAARENEKLQDAMLDVRIQKSPS-----IALLHQGPNKQAAEKELKSAEKDCVKLD 846

  Fly   450 TERCVDGWFKGKNWLDITGVFPGNYLTPLRARDQQQLMHQWKYVPQNADAQMAQVQQHPVAPDVR 514
            .:|     .|.:..:....|   .|.| |..|.::..: .|:.......||:...:|.      |
  Fly   847 NKR-----KKAEEAVKRADV---EYYT-LCVRSERARV-DWEMAVLRGSAQLQSSEQQ------R 895

  Fly   515 LNNM----------LSMQPPDLPPRQQQATATTTSCSVWSKPVEAL--FSRKSE-PK----PETA 562
            |.||          :|...|.|.....:......:|:| :|.::.:  ..|.|| |.    |:..
  Fly   896 LGNMHNFAQQYARLISDMNPILGGLSTRLQPQLDACNV-AKDMQVVRHIRRNSEGPSEQLLPDFY 959

  Fly   563 TASTTSS--------------------------SSSGAVGLMRRLTHMKTRS--------KSPGA 593
            ...||.:                          |..|..||.:.|.|.:.::        :|...
  Fly   960 CEHTTLAMNRERRKHALIKLLQLVKTDLERERRSRDGLRGLSQSLNHQEHQNITDKLYHIRSMLT 1024

  Fly   594 SLQQVPKEAISTNVEFTTNPSAKLHP----VHV---RSGSCPSQLQHSQPLNETPAAKTAAQQQQ 651
            .|:....:..|..:|....|.| .||    :|:   |:|...|.|:....|.....::| .|...
  Fly  1025 YLEGARLKLHSALLELDHKPRA-THPLAQHIHITRDRTGLQQSILKVPNWLKNNDKSQT-QQSTS 1087

  Fly   652 FLPKQLPSASTN--------------SVSYGSQRVKGSKERPHLICARQSLDAATF-RSMYN--- 698
            .|...:...:||              |.|:.:....||       |...|.....| ||..|   
  Fly  1088 MLAHDITDITTNHEDELPDENCSHLHSSSHSNNNSNGS-------CTDVSSVVKPFNRSKSNIET 1145

  Fly   699 NAASPPP--PTTSVAPAVYAGGQQQV-IPGGGAQSQLHANMIIAPSHRKSHSLDASHVLSPSSN- 759
            |..|.|.  .||:.|.||....:... :..|...:|.|.:      |..:|..|.......|:. 
  Fly  1146 NFTSQPKIISTTNAAIAVSVKSKTLANLQDGHHNNQQHHH------HHHNHHSDRGQADGGSNQQ 1204

  Fly   760 -----------------------------------MITEAAIKASATTKSPYCTRE--------- 780
                                               ::....|.....|:..|...:         
  Fly  1205 DSDFDEFSSQDEDDEPQQPQQQPQPLQSQQQQQQPLLQNPTINGQVQTQHFYQNAQELQKGQKNG 1269

  Fly   781 -----SRFRCIVPYPPNSDIELELHLGDIIYVQRKQKNGWYKGTHARTHKTGLFPASFVEPDC 838
                 .|.:.:..|.|....||||..||||.|..||.:||:.|. .|.| .|:|||::|| :|
  Fly  1270 SVPILGRCKALYSYTPKLYDELELSPGDIIEVHAKQDDGWWLGA-LRNH-IGIFPATYVE-EC 1329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POSHNP_523776.1 RAD18 6..>113 CDD:227719 16/80 (20%)
RING-HC_SH3RF3 8..53 CDD:438408 3/11 (27%)
SH3 139..191 CDD:473055 13/54 (24%)
SH3_SH3RF_2 199..251 CDD:212721 14/61 (23%)
SH3_SH3RF_3 424..477 CDD:212717 15/56 (27%)
SH3_SH3RF_C 782..836 CDD:212719 24/53 (45%)
NostNP_001285029.1 F-BAR_NOSTRIN 663..908 CDD:153342 48/267 (18%)
SH3_Nostrin 1276..1328 CDD:212757 25/54 (46%)

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