DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment POSH and Sh3rf1

DIOPT Version :10

Sequence 1:NP_523776.1 Gene:POSH / 36990 FlyBaseID:FBgn0040294 Length:838 Species:Drosophila melanogaster
Sequence 2:NP_942059.1 Gene:Sh3rf1 / 306417 RGDID:735154 Length:894 Species:Rattus norvegicus


Alignment Length:1016 Identity:301/1016 - (29%)
Similarity:436/1016 - (42%) Gaps:305/1016 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDEHTLNDLLECSVCLERLDTTSKVLPCQHTFCRKCLQDIVASQHKLRCPECRILVSCKIDELPP 65
            |||..|.|||||.|||||||.::||||||||||::||..||.|:::|||||||.||...:||||.
  Rat     1 MDESALLDLLECPVCLERLDASAKVLPCQHTFCKRCLLGIVGSRNELRCPECRTLVGSGVDELPS 65

  Fly    66 NVLLMRILEGMKQ---NAAAGKGEEKGEETETQPERAK------------------PQPPAESVA 109
            |:||:|:|:|:||   ....|.|   |..|.|...||:                  .||..::.:
  Rat    66 NILLVRLLDGIKQRPWKPGPGGG---GSTTCTNVLRAQGSTVVNCGSKDLQSPQCGQQPRVQAWS 127

  Fly   110 PPDNQLLQLQSHQQSHQPARHKQRRFLLPHAYALFDFASGEATDLKFKKGDLILIKHRIDNNWFV 174
            ||...:.|                   ||.|.||:::...|..||||.|||:|:::.::|.||:.
  Rat   128 PPVRGIPQ-------------------LPCAKALYNYEGKEPGDLKFSKGDIIILRRQVDENWYH 173

  Fly   175 GQANGQEGTFPINYVKVSVPLPM--PQCIAMYDFKMGPND-EEGCLEFKKSTVIQVMRRVDHNWA 236
            |:.||..|.||.|:|::..|||.  |||.|:|||::...: ::.||.|.|..|:.|:||||.|||
  Rat   174 GEVNGVHGFFPTNFVQIIKPLPQPPPQCKALYDFEVKDKEADKDCLPFAKDDVLTVIRRVDENWA 238

  Fly   237 EGRIGQTIGIFPIAFVELNAAAKKLLDSGLHTHPFCHPPKQQGQRALPPVPVIDPTVVTESSSGS 301
            ||.:...||||||::||.|:|||:|::..                 .||||.:|     .:...|
  Rat   239 EGMLADKIGIFPISYVEFNSAAKQLIEWD-----------------KPPVPGVD-----TAECPS 281

  Fly   302 SNSTPGSSNSSSTSSSNNCSPNHQISLPNTPQHVVASGSASVRFRDKGAKEKRHSLNALLGGGAP 366
            :.:...||.|..:.:..|....|..:            |.::..:...|.:.|||:..    ..|
  Rat   282 ATAAQSSSASKHSDTKKNTRKRHSFT------------SLTMANKSSQASQNRHSMEI----SPP 330

  Fly   367 LSLLQTNRHSAEILSLPHELSRLEVS-------SSTAL---KPTSAPQTS--------------- 406
            :.:..:|..:|..:|   |||.|..|       |:|.|   .|.|:|.|:               
  Rat   331 VLISSSNPTAAARIS---ELSGLSCSAPSQVHISTTGLIVTPPPSSPVTTGPSFTFPTDVPYQAA 392

  Fly   407 -----------RVLKTTV---------------------------------------QQQMQPNL 421
                       .:|.|||                                       :.|.:|::
  Rat   393 LGTMNPPLPPPPLLATTVLASTPSGATAAAVAAAAAAVAAGVGPRPAVGSTEQIAHLRPQTRPSV 457

  Fly   422 PWGYLALFPYKPRQTDELELKKGCVYIVTERCVDGWFKGKNW-LDITGVFPGNYLTPL-RARDQQ 484
               |:|::||.||:.|||||:||.:::|.|||.|||:||.:. ....|||||||:.|: ||    
  Rat   458 ---YVAIYPYTPRKEDELELRKGEMFLVFERCQDGWYKGTSMHTSKIGVFPGNYVAPVTRA---- 515

  Fly   485 QLMHQWKYVPQNADAQMAQVQQHPVAPDVRLNNMLSMQPPDLPPRQQQATATTTSCSVWSKPVEA 549
                       ..:|..|:|.........|...|:|......|.::.|......:.||       
  Rat   516 -----------VTNASQAKVPMSTAGQASRGVTMVSPSTAGGPAQKPQGNGVAGNPSV------- 562

  Fly   550 LFSRKSEPKPETATASTTSSSSSGAVGLMRRLTHMKTRSKSPGASLQQVPKEAIST----NVEFT 610
                     ..||..|.....:|....::..:|...|.:::         :.|:.|    |.|  
  Rat   563 ---------VPTAVVSAAHIQTSPQAKVLLHMTGQMTVNQA---------RNAVRTVAAHNQE-- 607

  Fly   611 TNPSAKLHPVHVRSGSC--------PSQLQHSQPL---------------NET------------ 640
             .|:|.:.|:.|::.:|        |.....||||               |.|            
  Rat   608 -RPTAAVTPIQVQNAACIGPASVGLPHHSLASQPLPPMVGPAAHIAAVNINRTSVPLACAAGASS 671

  Fly   641 ---PAAKTAAQQQQ-------FLPKQLPSA--STNSVSYGSQRVK----GSKERPHLICARQSLD 689
               |...|||.:.:       .|| .||::  |..|....|..||    ..||:..|:   :.|.
  Rat   672 LASPNMTTAALETEPSGRTVTILP-GLPTSPESAASACGNSSAVKPDKDSKKEKKGLL---KLLS 732

  Fly   690 AATFRSMYNNAASPP-PPTTSV------APAVYAGGQQQVIPGGGAQSQLHANMIIAPS------ 741
            .|:.:.  ....||| .||..|      .|...|.|.:  :|.||    :|..:...|:      
  Rat   733 GASTKR--KPRVSPPASPTLDVELGSGEVPLQGAVGPE--LPLGG----VHGRVGSCPTDGDGPV 789

  Fly   742 ------------HRKSHSLDASHVLSPSSNMITEAAIKASATTKSPYCTRESRFRCIVPYPPNSD 794
                        |||:.|||::..::|.......:........:...|   .|.|.:|.|||.|:
  Rat   790 AAGTAALAQDAFHRKTSSLDSAVPIAPPPRQACSSLGPVMNEARPVVC---ERHRVVVSYPPQSE 851

  Fly   795 IELELHLGDIIYVQRKQKNGWYKGTHARTHKTGLFPASFVE 835
            .||||..|||::|.:|:::||:|||..|..||||||.||||
  Rat   852 AELELKEGDIVFVHKKREDGWFKGTLQRNGKTGLFPGSFVE 892

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POSHNP_523776.1 RAD18 6..>113 CDD:227719 60/127 (47%)
RING-HC_SH3RF3 8..53 CDD:438408 32/44 (73%)
SH3 139..191 CDD:473055 23/51 (45%)
SH3_SH3RF_2 199..251 CDD:212721 27/52 (52%)
SH3_SH3RF_3 424..477 CDD:212717 29/53 (55%)
SH3_SH3RF_C 782..836 CDD:212719 32/54 (59%)
Sh3rf1NP_942059.1 RING-HC_SH3RF1 8..55 CDD:438406 34/46 (74%)
SH3 137..190 CDD:473055 24/52 (46%)
SH3_SH3RF1_2 200..254 CDD:212863 27/53 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 274..323 9/65 (14%)
Interaction with RAC1. /evidence=ECO:0000250|UniProtKB:Q7Z6J0 293..363 17/88 (19%)
Interaction with AKT2. /evidence=ECO:0000250 448..551 41/120 (34%)
SH3 457..511 CDD:473055 29/56 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 526..556 5/29 (17%)
PHA03247 <541..854 CDD:223021 73/355 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 682..751 19/74 (26%)
SH3_SH3RF_C 839..893 CDD:212719 32/54 (59%)

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