DRSC/TRiP Functional Genomics Resources

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Protein Alignment POSH and T09B4.2

DIOPT Version :10

Sequence 1:NP_523776.1 Gene:POSH / 36990 FlyBaseID:FBgn0040294 Length:838 Species:Drosophila melanogaster
Sequence 2:NP_491782.1 Gene:T09B4.2 / 172304 WormBaseID:WBGene00020376 Length:309 Species:Caenorhabditis elegans


Alignment Length:233 Identity:41/233 - (17%)
Similarity:74/233 - (31%) Gaps:96/233 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   584 MKTRSKSPGASLQQVPKEAISTNVEFTTNPSAKLHPVHVRSGSCPSQLQHSQPLNETPAAKTAAQ 648
            ::|| ||.|.....:|    ::|...:.:.|::|:|            ..::.::.....||:.|
 Worm     2 VQTR-KSYGTPSNYIP----TSNKRRSLDSSSRLYP------------DLTEQISNARTEKTSEQ 49

  Fly   649 QQQ--FLPKQLPSASTNSVSYGSQR------------------------------VKGSK----- 676
            |.:  |....|..:|    |:||:.                              :||||     
 Worm    50 QDENDFTDADLSFSS----SHGSEESDVSCNEVNEKWKYWTVIGIVFIAIVVGALIKGSKVTTNE 110

  Fly   677 ---------------ERPHLICARQSLDAATFRSMYNNAASPPP--------PTTSVAPAV---- 714
                           |.|.:....:.|.....:.:|....:..|        |...:|.||    
 Worm   111 SYESYIKSVRSVIKNEFPTISKENRDLLRLIGQKIYLEPENHAPLVVLVGGTPAKQIAEAVNRAV 175

  Fly   715 ---------YAGGQQQVIPGGGAQSQLHANM--IIAPS 741
                     .||.....:.....:::||||:  |:.|:
 Worm   176 QDAKSDEHTTAGKSSIRVESDTDRAELHANLQEILGPA 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
POSHNP_523776.1 RAD18 6..>113 CDD:227719
RING-HC_SH3RF3 8..53 CDD:438408
SH3 139..191 CDD:473055
SH3_SH3RF_2 199..251 CDD:212721
SH3_SH3RF_3 424..477 CDD:212717
SH3_SH3RF_C 782..836 CDD:212719
T09B4.2NP_491782.1 None
Blue background indicates that the domain is not in the aligned region.

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