DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpL18A and AgaP_AGAP012284

DIOPT Version :9

Sequence 1:NP_523774.1 Gene:RpL18A / 36985 FlyBaseID:FBgn0010409 Length:177 Species:Drosophila melanogaster
Sequence 2:XP_320252.4 Gene:AgaP_AGAP012284 / 1280405 VectorBaseID:AGAP012284 Length:177 Species:Anopheles gambiae


Alignment Length:177 Identity:139/177 - (78%)
Similarity:162/177 - (91%) Gaps:0/177 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRAKGLLKEYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIK 65
            |:|||:||||:|:|||||||||...||:||.|||||:||||||||||||||:||||.||||||:|
Mosquito     1 MKAKGVLKEYQVIGRKLPSEKEKNPPLFKMHIFAPDHIVAKSRFWYFLRQLRKFKKATGEIVSVK 65

  Fly    66 QVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVD 130
            ::.|.:|:|:|||||||||||||||||||||||||||||||||||.||.:||||||||||||||:
Mosquito    66 RILEKTPLKVKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYSDMASRHRARAHSIQIIKVE 130

  Fly   131 SIPAAKTRRVHVKQFHDSKIKFPLVQRVHHKGNRKLFSFRKPRTYFQ 177
            ||.|:||||.|:||||:|||:||||||.|||..|||||:|:|.|::|
Mosquito   131 SIAASKTRRAHIKQFHNSKIRFPLVQRYHHKRYRKLFSYRRPETFYQ 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpL18ANP_523774.1 RPL20A 69..153 CDD:225068 69/83 (83%)
AgaP_AGAP012284XP_320252.4 Ribosomal_L18ae <85..130 CDD:250854 41/44 (93%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 220 1.000 Domainoid score I5736
eggNOG 1 0.900 - - E1_COG2157
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H68104
Inparanoid 1 1.050 302 1.000 Inparanoid score I5062
OMA 1 1.010 - - QHG53815
OrthoDB 1 1.010 - - D1265349at2759
OrthoFinder 1 1.000 - - FOG0002143
OrthoInspector 1 1.000 - - oto109201
Panther 1 1.100 - - LDO PTHR10052
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1428
TreeFam 1 0.960 - -
1312.940

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