DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4853 and LTE1

DIOPT Version :10

Sequence 1:NP_611222.2 Gene:CG4853 / 36974 FlyBaseID:FBgn0034230 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_009378.1 Gene:LTE1 / 851209 SGDID:S000000022 Length:1435 Species:Saccharomyces cerevisiae


Alignment Length:746 Identity:145/746 - (19%)
Similarity:259/746 - (34%) Gaps:240/746 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 SLTTTEEVLV-----SRNGQILDERTVETKENFNHQSHQKEIWHPVKQQSALARATPENALKYRT 153
            ::|.|:|:.:     :::..:::|  :...|..|.:.::|         |||...|....:   :
Yeast   791 AITPTKELSIVDPEQNKSNSVIEE--ISEIEPLNLEYNKK---------SALYSDTSSTVI---S 841

  Fly   154 TSNSTFASQATDSDERPVDPLGRQLN--QTFSNASLMSSSSAITGS-----DQVIGSVSSTTIGD 211
            .|.|.....|.:|      ||.:..|  :.|.|.:.:|.::.|..|     :.|:..::|.|.| 
Yeast   842 ISTSKLFESAQNS------PLKQTQNPQREFPNGTSVSETNRIRLSIAPTIESVVSDLNSITTG- 899

  Fly   212 KSSNISSCDSGHDGLFHSVSMSAPWSHPR-------------DTL--TDSLY----CDIPSSADE 257
              |.:.:.::..|         .|..|.|             |.:  |.||:    .|:..|.::
Yeast   900 --STVETFETSRD---------LPVPHQRIINLREEYQRGNQDIISNTSSLHELKTIDLSDSNND 953

  Fly   258 SDAVSILNTHLKITEPFDCQTAPVYAKDIPKKGNLDSVVNLLINNNTKDLRFAFLTTSRLFSPPH 322
            .::.|   ||.|..:.|..          |..|::|....:   .|.::|:..||...   |..:
Yeast   954 LESPS---THAKNNKYFFS----------PDDGSIDVASPM---KNVEELKSKFLKNE---SETN 999

  Fly   323 QLLSKIIAKID-------NEEENVLRLLNEWLDTCPGDFSHELLLQELENKRNVKGLAAFLD--- 377
            ..:|..:..:|       :...|..|..:|      ..|:..|      ||:|:..:|..||   
Yeast  1000 SNISGSVLTMDDIDINDTSSARNTRRANSE------SAFTGSL------NKKNLNEIANMLDDSI 1052

  Fly   378 -------------GIPQALAQKDENGRS------------------QLNNLLTKQSSASSLGRQS 411
                         |..:.:.:|.||.:|                  .||||.:.|:|.:...:..
Yeast  1053 NDDPITVALMKLEGTYEKIPEKPENTKSSDAIGIKTSKLADEVEMLNLNNLPSFQNSPAEKRKSL 1117

  Fly   412 SIKSLKRFAANVYKTDN---------------------------------------------VLN 431
            .|:..::...|:..|.:                                             :.|
Yeast  1118 LIERRRQTIMNIPFTPDQSEKEGFTSSSPEKIDVSANVDVAVQAAQIQELIGQYRIHDSRLMISN 1182

  Fly   432 NCS--------SAFELAHQLYAIEYAYLSQIRLEEFVEILEKDELKTCIS--------QTKAGTL 480
            |.|        .:..:|.|:..||...|.:|..::.:::..|.|....||        :|.:|  
Yeast  1183 NESHVPFILMYDSLSVAQQMTLIEKEILGEIDWKDLLDLKMKHEGPQVISWLQLLVRNETLSG-- 1245

  Fly   481 GSNCISQVTIDSYVQWFNQLSYLTATEILKLGKKSQRAQMIDFWVETALECFNTGNFNSLMAILT 545
                     ||..:..||.......:|||.......:..:|..::..|..|....|||:||.|:.
Yeast  1246 ---------IDLAISRFNLTVDWIISEILLTKSSKMKRNVIQRFIHVADHCRTFQNFNTLMEIIL 1301

  Fly   546 ALNLTAIARLKKTWAKVQTTKFEGLEHQMDPSSNFLNYRSTMKAAVWRSEREMANEIERAI--IP 608
            ||:.:.:.:....|..::.......|......|...|| ||:        |.:.|.:...:  :|
Yeast  1302 ALSSSVVQKFTDAWRLIEPGDLLTWEELKKIPSLDRNY-STI--------RNLLNSVNPLVGCVP 1357

  Fly   609 FFSLFLKDLHAINESHETKLANGYINFEKCLHLGTQL-RNF---GKWQRLDCPYEQLPSVVSYLL 669
            |..::|.||.|..|..:..|.:..:|:.| .....|: :||   .:|.:.            |..
Yeast  1358 FIVVYLSDLSANAEKKDWILEDKVVNYNK-FDTNVQIVKNFIQRVQWSKF------------YTF 1409

  Fly   670 KAEVLSEDLLMKASYESEPPETGEEKDHYKT 700
            |   ::.:||.|..|.|  ..|.||.:...|
Yeast  1410 K---VNHELLSKCVYIS--TLTQEEINELST 1435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4853NP_611222.2 REM 292..>365 CDD:470601 13/79 (16%)
RasGEF 438..638 CDD:459872 48/209 (23%)
LTE1NP_009378.1 RasGEFN 28..156 CDD:214571
RasGEF 1190..1434 CDD:238087 63/281 (22%)
Blue background indicates that the domain is not in the aligned region.

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