DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4853 and CDC25

DIOPT Version :9

Sequence 1:NP_611222.2 Gene:CG4853 / 36974 FlyBaseID:FBgn0034230 Length:709 Species:Drosophila melanogaster
Sequence 2:NP_013413.1 Gene:CDC25 / 851019 SGDID:S000004301 Length:1589 Species:Saccharomyces cerevisiae


Alignment Length:655 Identity:135/655 - (20%)
Similarity:250/655 - (38%) Gaps:170/655 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 VLVSRNGQILDERTVETKEN-FNHQSHQKEIWHPVKQQSALARATPENALKYRTTSNSTFASQAT 164
            |.:|....|:.::.:|.:|| .|:.:.       :.:.:..|........|:....:..::...:
Yeast  1016 VEISNLACIIVDQLIEERENLLNYAAR-------MMKNNLTAELLKGEQEKWFDIYSEDYSDDDS 1073

  Fly   165 DSDERPV-DPLGRQ-----------------LNQTFSNASLMSSSSAITG--SDQVIGSVSSTTI 209
            ::||..: |.||.:                 |...:..:.:..|...|.|  .:.:|..::|..:
Yeast  1074 ENDEAIIDDELGSEDYIERKAANIEKNLPWFLTSDYETSLVYDSRGKIRGGTKEALIEHLTSHEL 1138

  Fly   210 GDKSSNISSCDSGHDGLFHSVSMSAPW---------SHPRDTLT---DSLYCDIPSSADESDAVS 262
            .|.:.|::...:     |.|:..:..:         .:|.:.|:   .:::.:..|:..:...|:
Yeast  1139 VDAAFNVTMLIT-----FRSILTTREFFYALIYRYNLYPPEGLSYDDYNIWIEKKSNPIKCRVVN 1198

  Fly   263 ILNTHLKITEPFDCQTAPVYAKDIPKKGNLDSVVNLLINNNTKDLRFAFLTTSRLFSPPHQLLSK 327
            |:.|.|  |:.:   |...|...||          |::|       ||.:..|........||.|
Yeast  1199 IMRTFL--TQYW---TRNYYEPGIP----------LILN-------FAKMVVSEKIPGAEDLLQK 1241

  Fly   328 IIAKIDNEEENVLRLLNEWLDTCPGDFSHELLLQELENKRNVKGLAAFLDGIPQALAQKDENGRS 392
            |..|:.||.|.                      :.::.|:.        |.: .|:.|       
Yeast  1242 INEKLINENEK----------------------EPVDPKQQ--------DSV-SAVVQ------- 1268

  Fly   393 QLNNLLTKQSSASSLGRQSSIKSLKRFAANVYKTDNVLNNCSSAFELAHQLYAIE---YAYLSQI 454
                 .||:.:.|.:...||               ::.::.||||....:|..::   |.|.:|:
Yeast  1269 -----TTKRDNKSPIHMSSS---------------SLPSSASSAFFRLKKLKLLDIDPYTYATQL 1313

  Fly   455 RLEEFVEILEKD-----ELKTCISQTKAGTLGSNCISQVTIDSYVQWFNQLSYLTATEILKLGKK 514
                  .:||.|     .:..|:.:. .||...|......|..::...|.|:...:..|:|....
Yeast  1314 ------TVLEHDLYLRITMFECLDRA-WGTKYCNMGGSPNITKFIANANTLTNFVSHTIVKQADV 1371

  Fly   515 SQRAQMIDFWVETALECFNTGNFNSLMAILTALNLTAIARLKKTWAKVQTTK---FEGLEHQMDP 576
            ..|:::..::|..|..|....||:|:.||::||..:.|.||||||..|.|..   .:.|.:.||.
Yeast  1372 KTRSKLTQYFVTVAQHCKELNNFSSMTAIVSALYSSPIYRLKKTWDLVSTESKDLLKNLNNLMDS 1436

  Fly   577 SSNFLNYRSTMKAAVWRSEREMANEIERAIIPFFSLFLKDLHAINESHETKLANGYINFEKCLHL 641
            ..||:.||..:::..           :.|.:|||.::|.||        |....|..:|   ||.
Yeast  1437 KRNFVKYRELLRSVT-----------DVACVPFFGVYLSDL--------TFTFVGNPDF---LHN 1479

  Fly   642 GTQLRNFGKWQRLDCPYEQLPSVVSYLLKAEVLSE-DLLMKASYESEPPETGEEKDHYKTLKA-A 704
            .|.:.||.|..::....|::.|...:..|.:.|.: ..:::||.|:.|   ..||.:..:|:. .
Yeast  1480 STNIINFSKRTKIANIVEEIISFKRFHYKLKRLDDIQTVIEASLENVP---HIEKQYQLSLQVEP 1541

  Fly   705 RKSNT 709
            |..||
Yeast  1542 RSGNT 1546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4853NP_611222.2 RasGEF_N 288..365 CDD:279012 13/76 (17%)
RasGEF 438..638 CDD:279011 53/210 (25%)
CDC25NP_013413.1 SH3_Sdc25 62..122 CDD:212816
RasGEFN 1117..1246 CDD:214571 30/155 (19%)
RasGEF 1301..1543 CDD:214539 69/273 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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